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Biocatalytic Production of Glucosamine from N-Acetylglucosamine by Diacetylchitobiose Deacetylase
1Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, Jiangnan University, Wuxi 214122, P.R. China, 2Key Laboratory of Industrial Biotechnology, Ministry of Education, Jiangnan University, Wuxi 214122, P.R. China, 3School of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta GA 30332, USA
J. Microbiol. Biotechnol. 2018; 28(11): 1850-1858
Published November 28, 2018 https://doi.org/10.4014/jmb.1805.05061
Copyright © The Korean Society for Microbiology and Biotechnology.
Abstract
Keywords
Introduction
Glucosamine (GlcN, 2-amino-2-deoxy-D-glucose) is an amino sugar obtained by substitution of a hydroxyl group in glucose with an amino group. GlcN has been widely used in food, cosmetics, and pharmaceutical industries, especially in osteoarthritis treatment [1, 2]. In humans, GlcN is a precursor of the disaccharide units of glycosaminoglycans (such as hyaluronic acid, chondroitin sulfate, and keratan sulfate), which are necessary to repair and maintain healthy cartilage and joint function [3, 4]. Currently, GlcN is mainly produced by acid hydrolysis of chitin and chitosan extracted from crab and shrimp shells. On the other hand, this extraction method poses some problems such as severe environmental pollution and potential allergic reactions in consumers. Recently, a new microbial fermentation procedure for the production of GlcN and GlcNAc was developed. The strains used for GlcN and GlcNAc production include fungi, viz.,
Deacetylase has been mentioned in the literature in this regard, but has some disadvantages, such as poor stability, low tolerance of its substrate, low activity, and a low yield. A novel pathway of chitin degradation in
-
Fig. 1. The deacetylation reaction of diacetylchitobiose deacetylase (Dacph) from
P. horikoshii .
In the present study, we expressed diacetylchitobiose deacetylase from
Materials and Methods
Materials, Plasmids, and Strains
Bacterial strains, plasmids, and primers used in this study are listed in Table 1.
-
Table 1 . Strains, plasmids, and primers used in this study.
Strain, plasmid or primer Description or sequence (5’-3’) Source Strains E. coli JM109Cloning strain Takara, Ostu, Japan E. coli BL21(DE3)Expression strain Invitrogen,Carlsbad, CA B. subtilis WB600Expression strain Lab stock E. coli -DacE. coli BL21(DE3) containing a pET-28a-DacThis work B. subtilis -DacB. subtilis WB600 containing a pP43NMK-DacThis work Plasmids pET-28a(+) Kanr Invitrogen, Carlsbad, CA pP43NMK Kanr ; Ampr Virginia Tech, USA pET-28a-Dac pET-28a(+) containing Dac This work pP43NMK-Dac pP43NMK containing Dac This work Primers Dacph-F1 GTGGACAGCAAATGGGTCGC GGATCC ATGGTAGTGAACATGTTCGAAGDacph-R1 CAGTGGTGGTGGTGGTGGTG CTCGAG GATAAGGTCAGTAAACGGTGTDacph-F2 GTAAAATATAAAGTGATAGC GGTACC ATTATAGGTAAGAGAGGAATDacph-R2 ACCATGATTACGCCAAGCTT CTGCAG TCAGATCAGGTCCGTAAACGAmpr, ampicillin resistance; Kanr, kanamycin resistance.
Italic letters represent the restriction enzyme sites, and underlined letters represent homologous sequences for cloning.
Recombinant-Plasmid Construction and Bacterial Transformation
The genes encoding Dacph (PH0499) were synthesized by Sangon Biotech Co., Ltd. (China) and were optimized for expression in
For expression in
Biocatalyst Preparation
The engineered
Cell Density and Biocatalytic Assays
OD600 was measured every 2 h in the growth culture until the stationary phase to construct the growth curve. OD600 was determined on a UVmini-1240 spectrophotometer (Shimadzu, Japan) and was converted to dry cell weight (DCW) according to the following equation: DCW (g/l) = (0.4442 × OD600) − 0.021.
Next, the reaction rate was determined in a whole-cell biocatalytic reaction. Namely, 50 g/l GlcNAc and 18.6 g/l whole-cell biocatalyst were mixed in 50 mM sodium phosphate buffer (pH 7.5). The reaction proceeded in a 250-ml shaking flask and incubated on a rotary shaker at 30°C for 0.5 h. To determine the conversion ratio of GlcNActo GlcN, different concentrations of GlcNAc were added into the sodium phosphate buffer containing 18.6 g/l cells. The reaction was carried out in 250-ml shaking flasks and incubated on a rotary shaker at 30–90°C and pH 5.0–9.0 for 0.5–10h. The reaction was stopped by adding HCl to the system to a final concentration of 0.1 M, then centrifuged at 8,000 ×
Optimization of pH, Cell Density, Substrate Concentration, and Temperature
For optimization of all the variables, the reaction was conducted in 250-ml shaking flasks containing 20 ml of the reaction mixture and incubated on a rotary shaker for 0.5 h. For pH optimization, the reaction was conducted at 30°C in sodium phosphate buffer (pH 5.0–9.0) containing 50 g/l GlcNAc. For DCW optimization, the conditions were 50 g/l GlcNAc, 30°C, and pH 7.5. To optimize the substrate concentration, the reaction was conducted at pH 7.5, 30°C, with the GlcNAc concentration ranging from 10 to 80 g/l. For temperature optimization, the reaction was carried out at pH 7.5, with temperatures varying between 30°C and 90°C. To optimize the catalytic time, the reaction was carried out at different temperatures (30-90°C) and pH 7.5 for 0.5-5h. The resulting samples were centrifuged, and the supernatant was tested by HPLC.
Production of GlcN in 3-L Bioreactor
The production of GlcN was performed in 3-L bioreactor (BioFlo 115, New Brunswick Scientific Co., USA) using a 1.4-L reaction mixture. Reactions were performed using the standard whole-cell biocatalytic and the conditions based on the optimal conditions in shaking flask, as described above. Agitation was provided by 2 6-bladed disk turbines. The pH was automatically kept at 7.5 via the addition of 5 M NaOH, and the temperature was maintained at 40°C. The aeration rate and agitation speed were 1.5 vvm and 300 rpm, respectively.
The Stability of GlcN and GlcNAc under the Conversion Conditions
The determination of GlcN and GlcNAc stability is carried out under the optimal conversion conditions. The conditions were 40°C, pH 7.5 (50 mM sodium phosphate buffer) and 50 g/l GLcNAc for incubating 0-5 h without cells. As for the stability of GlcN, the experiments were performed at 40°C, pH 7.5 (50 mM sodium phosphate buffer) and 50 g/l GLcN for 0-5 h without cells. The concentration of GlcN and GlcNAc were measured every 1 h to construct the stability curve were tested by HPLC.
Analytical Methods
GlcN were quantified by HPLC (Agilent1260 series, USA) on a Thermo ODS-2 HYPERSIL C18 column (250 mm × 4.0 mm, USA) by the
Sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) was performed on a 10% running gel (Bio-Rad Laboratories, USA). The target proteins were released from the cells by sonication, then, samples were incubated in denaturing buffer at 100 40°C for 10 min. The prepared samples and marker were loaded into wells and separated by electrophoresis in MES SDS running buffer, and resolved proteins were visualized by staining with Coomassie Brilliant Blue G250.
Protein concentration was measured by Bradford method (Bradford 1976) using bovine serum albumin as the standard.
The biocatalyst activity was calculated according to the following equation:
Activity = C(GlcN)/(DCW × T)
where C(GlcN) is the concentration (g/l) of GlcN that was generated by the reaction, DCW is expressed in g/l, and T denotes reaction time (min).
The reaction rate is expressed as
Reaction rate = C(GlcN)/T
where C(GlcN) is the concentration (g/l) of GlcN that was generated by the reaction, and T represents reaction time (h).
The conversion yield is given by
Conversion ratio (%) = (M2/M1) × 100
where M1 is the amount (mmol) of GlcNAc before transformation, M2 is the amount of GlcN that was generated by the reaction.
Statistical Analysis
All the experiments were conducted at least three times, and the results were expressed as mean ± standard deviation (
Results and Discussion
Expression of Diacetylchitobiose Deacetylase in B. subtilis and E. coli
The Dacph gene (from
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Fig. 2. SDS-PAGE and deacetylase activity analysis of recombinant strains. (A) SDS-PAGE analysis of Dacph expression in the recombinant strains. M: protein marker, 1:
E. coli -Control (harboring blank pET-28a (+) plasmid); 2:E. coli -Dac (expressing Dacph enzyme inE. coli BL21(DE3)); 3:B. subtilis -control (harboring blank pP43NMK plasmid); 4:B. subtilis -Dac (expressing Dacph enzyme inB. subtilis WB600). (B) Comparison of the whole-cell biocatalytic deacetylase activity of recombinantE. coli BL21(DE3) andB. subtilis WB600 expressing Dacph enzyme.E. coli -Control, harboring blank pET-28a(+) plasmid;B. subtilis -control, harboring blank pP43NMK plasmid;E. coli -Dac, expressing Dacph enzyme inE. coli BL21(DE3);B. subtilis -Dac, expressing Dacph enzyme inB. subtilis WB600; The data shown are mean values from triplicates with error bars indicating the standard deviation.
The Influence of Dacph Overexpression on Cell Growth
Next, we determined whether the expression of Dacph affects cell growth of
Effects of Key Variables on GlcN Production by the Whole-Cell Biocatalysts
The enzymatic properties were evaluated to optimize the key variables of GlcN production by each whole-cell biocatalyst. The effects of pH on GlcN production were evaluated by analyzing the whole-cell biocatalyst reaction rate in Na2HPO4–NaH2PO4 buffers at pH levels ranging from 5.0 to 9.0 (Fig. 3A). The highest biocatalyst reaction rate (17.9 g·l−1·h−1) was obtained when bioconversion was performed at pH 7.5, generally in agreement with one report showing that the optimal pH for GlcNAc catalysis is 8.0 [13]. The effect of the biocatalyst concentration on biocatalyst reaction rate was evaluated next. The highest reaction rate was 17.8 g·l−1·h−1 at 18.6 g/l cells Meaning needs verification (Fig. 3B). To determine the optimal substrate concentration for bioconversion, the reactions were run at GlcNAc concentrations ranging from 10 to 80 g/l. The highest reaction rate was 18.9 g·l−1·h−1 at 50 g/l substrate (Fig. 3C). Fig. 3D shows the influence of reaction temperatures ranging from 30°C to 90°C. The reaction rate increased with the increase of temperature. The highest reaction rate was 49.6 g·l−1·h−1 at 80°C. This finding is consistent with results of a report showing that Dacph has excellent thermal stability, retaining activity at 85°C for more than 30 min [21]. Product inhibition of Dacph was assessed by measuring GlcN production. The biocatalyst reaction rate decreased sharply as GlcN concentration increased (Fig. S3).
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Fig. 3. The effect of pH, DCW, substrate and temperature on whole-cell biotransformation. (A) The reaction was conducted at 30°C in sodium phosphate buffer (pH 5.0-9.0) containing 50 g/l GlcNAc. (B) The reaction was performed at the condition of 50 g/l GlcNAc, 30°C, and pH 7.5. (C) The reaction was conducted at pH 7.5, 30°C, with the GlcNAc concentrations ranging from 10 to 80 g/l. (D) The reaction was carried out at pH 7.5, with temperatures varying between 30°C and 90°C. Results were obtained with recombinant
B. subtilis whole-cell biocatalyst. The data shown are mean values from triplicates with error bars indicating the standard deviation.
The stability of GlcN was influenced by the temperature and pH. According to one study, the degradation of GlcN increases with the increasing temperature and pH [8]. As shown in Fig. 3, we measured the GlcN concentration in the reaction system to construct the curve of yield of GlcN over time at different conversion temperatures (ranging from 30°C to 90°C).
According to the Fig. 3D, the highest reaction rate was 49.6 g·l−1·h−1 when the temperature was higher than 50°C. But as shown in Fig. 4, the yield of GlcN decreased sharply at higher temperatures. Therefore, this bioconversion wasted a lot of GlcN when performed at a higher temperature. This phenomenon is reasonable. One possible explanation for the phenomenon is that the stability of GlcN was obviously influenced by the temperature at pH 7.5; the degradation of GlcN increases with the increasing temperature. When the reaction was performed at a higher temperature, the production of GlcN occurs at a higher reaction rate. However, the GlcN, deacetyled from GlcNAc, was unstable in the current high temperature environment, and can be converted into other derivatives. As shown in Fig. 4, the yield of GlcN steadily increased when the reaction temperature was lower than 40°C.
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Fig. 4. Time profile of the GlcN production (g/l) under different reaction temperatures (30-90°C). Symbol denotes: ■, 30°C; ●, 40°C; ▲, 50°C; ▼, 60°C; ◆, 70°C; ○, 80°C; □, 90°C. Results were obtained with recombinant
B. subtilis whole-cell biocatalyst. The reactions were conducted at pH 7.5 in sodium phosphate buffer containing 50 g/l GlcNAc and 18.6 g/l cells. The data shown are mean values from triplicates with error bars indicating the standard deviation.
In addition, we measured the stability of substrate (GlcNAc) and product (GlcN) under the optimal bioconversion conditions, the experiments were carried out with standard substrate and product in the reaction buffer solution (50 mM sodium phosphate buffer, pH 7.5) without cells at 40°C. According to the Fig. S4, the substrate (GlcNAc) was stable at the optimal bioconversion conditions. When the incubation time was 3 h, the end of biocatalytic production of GlcN, the concentration of GlcNAc decreased from 50 to 49.3 g/l and only 1.4% reduction. When the incubation time was extended to 5 h, the concentration of GlcNAc was 48.6 g/l and decreased by 2.8%. As shown in Fig. S4, under the optimal reaction conditions, the GlcN was relatively stable in the first 3 h. The concentration of GlcN decreased from 50 to 48.1 g/l and only 3.8% reduction. When the incubation time was extended, the concentration of GlcN decreased rapidly, the concentration of GlcN was 40.75 g/l at 5 h and decreased by 18.9%.
Production of GlcN by the Whole-Cell Biocatalysts
To use the whole-cell biocatalyst for GlcN production, the conversion ratio and the yield of GlcN were evaluated under different conditions. According to the above data, we obtained 30.2 g/l GlcN when the reaction was performed at 40°C, pH 7.5, 18.6 g/l cells, and 50 g/l GlcNAc in 250-ml shaking flask. In order to optimize the reaction time and determine the trend of pH in the catalytic system, bioconversion was evaluated in a shaking flask containing 18.6 g/l cells and 50 g/l GlcNAc at 40°C and pH 7.5. The highest yield of GlcN was obtained at 3 h and then decreased. The pH value in the catalytic system was gradually decreased from 7.5 to 6.3. For the conversion efficiency and economical industrial application, 3 h seems to be the ideal operation duration. Overall, the optimal conditions were 18.6 g/l cells at 40°C, pH 7.5 for 3 h (Fig. 5A).
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Fig. 5. Time profile of various parameters in different catalytic systems. (A) Time course of GlcNproduction (■) and pH value (△) catalyzation in a 250-ml shaking flask. Results were obtained with recombinant
B. subtilis whole-cell biocatalyst. The reaction was performed at 40°C in sodium phosphate buffer (pH 7.5) containing 50 g/l GlcNAc and 18.6 g/l cells. The data shown are mean values from triplicates with error bars indicating the standard deviation. (B) Time profile of various substances concentrations in the 3-L bioreactor catalytic system. The reaction was performed in 3-L bioreactor under the optimal conditions. The pH was automatically kept at 7.5 via the addition of 5 M NaOH, and the temperature was maintained at 40°C. Results were obtained with recombinantB. subtilis whole-cell biocatalyst. The data shown are mean values from triplicates with error bars indicating the standard deviation.
To attain a higher titer of GlcN, amplification experiments of GlcN production were carried out in 3-L bioreactor based on the optimal conditions in shaking flask. The concentration of various substances in the catalytic system varies with time were determined. The trend was generally consistent with shaking flask. The highest yield of GlcN (35.3 g/l) was obtained at 3 h and then decreased (Fig. 5B). The yield of GlcN and conversion ratio in 3-L bioreactor were improved, where environmental conditions are well-controlled. The maximal titer of GlcN increased from 30.2 to 35.3 g/l, and the molar conversion ratio of GlcNAc to GlcN increased from 74.7% to 86.8% (Fig. 6).
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Fig. 6. Comparison of the GlcNproduction during the conversion between catalyzed in 3-L bioreactor (□) and 250-ml shaking flask (△). Both reactions were performed under the optimal conditions, 40°C, pH 7.5, 18.6 g/l cells and 50 g/l GlcNAc. The data shown are mean values from triplicates with error bars indicating the standard deviation.
In summary, we successfully devised a whole-cell biotransformation method for GlcN production by expressing diacetylchitobiose deacetylase from
Supplemental Materials
Acknowledgments
This work was financially supported by the National Outstanding Youth Foundation (31622001), 863 Program (2014AA021200, 2014AA021201), 111 project (111-2-06) and the China Postdoctoral Science Foundation (2018M630523).
Conflict of Interest
The authors have no financial conflicts of interest to declare.
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Related articles in JMB

Article
Research article
J. Microbiol. Biotechnol. 2018; 28(11): 1850-1858
Published online November 28, 2018 https://doi.org/10.4014/jmb.1805.05061
Copyright © The Korean Society for Microbiology and Biotechnology.
Biocatalytic Production of Glucosamine from N-Acetylglucosamine by Diacetylchitobiose Deacetylase
Zhu Jiang 1, Xueqin Lv 1, 2, Yanfeng Liu 1, 2, Hyun-dong Shin 3, Jianghua Li 2, Guocheng Du 1, 2 and Long Liu 1, 2*
1Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, Jiangnan University, Wuxi 214122, P.R. China, 2Key Laboratory of Industrial Biotechnology, Ministry of Education, Jiangnan University, Wuxi 214122, P.R. China, 3School of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta GA 30332, USA
Abstract
Glucosamine (GlcN) is widely used in the nutraceutical and pharmaceutical industries.
Currently, GlcN is mainly produced by traditional multistep chemical synthesis and acid
hydrolysis, which can cause severe environmental pollution, require a long prodution period
but a lower yield. The aim of this work was to develop a whole-cell biocatalytic process for the
environment-friendly synthesis of glucosamine (GlcN) from N-acetylglucosamine (GlcNAc).
We constructed a recombinant Escherichia coli and Bacillus subtilis strains as efficient whole-cell
biocatalysts via expression of diacetylchitobiose deacetylase (Dacph) from Pyrococcus furiosus.
Although both strains were biocatalytically active, the performance of B. subtilis was better. To
enhance GlcN production, optimal reaction conditions were found: B. subtilis whole-cell
biocatalyst 18.6 g/l, temperature 40°C, pH 7.5, GlcNAc concentration 50 g/l and reaction time
3 h. Under the above conditions, the maximal titer of GlcN was 35.3 g/l, the molar conversion
ratio was 86.8% in 3-L bioreactor. This paper shows an efficient biotransformation process for
the biotechnological production of GlcN in B. subtilis that is more environmentally friendly
than the traditional multistep chemical synthesis approach. The biocatalytic process described
here has the advantage of less environmental pollution and thus has great potential for largescale
production of GlcN in an environment-friendly manner.
Keywords: Whole-cell biocatalyst, glucosamine, diacetylchitobiose, deacetylase, Bacillus subtilis
Introduction
Glucosamine (GlcN, 2-amino-2-deoxy-D-glucose) is an amino sugar obtained by substitution of a hydroxyl group in glucose with an amino group. GlcN has been widely used in food, cosmetics, and pharmaceutical industries, especially in osteoarthritis treatment [1, 2]. In humans, GlcN is a precursor of the disaccharide units of glycosaminoglycans (such as hyaluronic acid, chondroitin sulfate, and keratan sulfate), which are necessary to repair and maintain healthy cartilage and joint function [3, 4]. Currently, GlcN is mainly produced by acid hydrolysis of chitin and chitosan extracted from crab and shrimp shells. On the other hand, this extraction method poses some problems such as severe environmental pollution and potential allergic reactions in consumers. Recently, a new microbial fermentation procedure for the production of GlcN and GlcNAc was developed. The strains used for GlcN and GlcNAc production include fungi, viz.,
Deacetylase has been mentioned in the literature in this regard, but has some disadvantages, such as poor stability, low tolerance of its substrate, low activity, and a low yield. A novel pathway of chitin degradation in
-
Figure 1. The deacetylation reaction of diacetylchitobiose deacetylase (Dacph) from
P. horikoshii .
In the present study, we expressed diacetylchitobiose deacetylase from
Materials and Methods
Materials, Plasmids, and Strains
Bacterial strains, plasmids, and primers used in this study are listed in Table 1.
-
Table 1 . Strains, plasmids, and primers used in this study..
Strain, plasmid or primer Description or sequence (5’-3’) Source Strains E. coli JM109Cloning strain Takara, Ostu, Japan E. coli BL21(DE3)Expression strain Invitrogen,Carlsbad, CA B. subtilis WB600Expression strain Lab stock E. coli -DacE. coli BL21(DE3) containing a pET-28a-DacThis work B. subtilis -DacB. subtilis WB600 containing a pP43NMK-DacThis work Plasmids pET-28a(+) Kanr Invitrogen, Carlsbad, CA pP43NMK Kanr ; Ampr Virginia Tech, USA pET-28a-Dac pET-28a(+) containing Dac This work pP43NMK-Dac pP43NMK containing Dac This work Primers Dacph-F1 GTGGACAGCAAATGGGTCGC GGATCC ATGGTAGTGAACATGTTCGAAGDacph-R1 CAGTGGTGGTGGTGGTGGTG CTCGAG GATAAGGTCAGTAAACGGTGTDacph-F2 GTAAAATATAAAGTGATAGC GGTACC ATTATAGGTAAGAGAGGAATDacph-R2 ACCATGATTACGCCAAGCTT CTGCAG TCAGATCAGGTCCGTAAACGAmpr, ampicillin resistance; Kanr, kanamycin resistance..
Italic letters represent the restriction enzyme sites, and underlined letters represent homologous sequences for cloning..
Recombinant-Plasmid Construction and Bacterial Transformation
The genes encoding Dacph (PH0499) were synthesized by Sangon Biotech Co., Ltd. (China) and were optimized for expression in
For expression in
Biocatalyst Preparation
The engineered
Cell Density and Biocatalytic Assays
OD600 was measured every 2 h in the growth culture until the stationary phase to construct the growth curve. OD600 was determined on a UVmini-1240 spectrophotometer (Shimadzu, Japan) and was converted to dry cell weight (DCW) according to the following equation: DCW (g/l) = (0.4442 × OD600) − 0.021.
Next, the reaction rate was determined in a whole-cell biocatalytic reaction. Namely, 50 g/l GlcNAc and 18.6 g/l whole-cell biocatalyst were mixed in 50 mM sodium phosphate buffer (pH 7.5). The reaction proceeded in a 250-ml shaking flask and incubated on a rotary shaker at 30°C for 0.5 h. To determine the conversion ratio of GlcNActo GlcN, different concentrations of GlcNAc were added into the sodium phosphate buffer containing 18.6 g/l cells. The reaction was carried out in 250-ml shaking flasks and incubated on a rotary shaker at 30–90°C and pH 5.0–9.0 for 0.5–10h. The reaction was stopped by adding HCl to the system to a final concentration of 0.1 M, then centrifuged at 8,000 ×
Optimization of pH, Cell Density, Substrate Concentration, and Temperature
For optimization of all the variables, the reaction was conducted in 250-ml shaking flasks containing 20 ml of the reaction mixture and incubated on a rotary shaker for 0.5 h. For pH optimization, the reaction was conducted at 30°C in sodium phosphate buffer (pH 5.0–9.0) containing 50 g/l GlcNAc. For DCW optimization, the conditions were 50 g/l GlcNAc, 30°C, and pH 7.5. To optimize the substrate concentration, the reaction was conducted at pH 7.5, 30°C, with the GlcNAc concentration ranging from 10 to 80 g/l. For temperature optimization, the reaction was carried out at pH 7.5, with temperatures varying between 30°C and 90°C. To optimize the catalytic time, the reaction was carried out at different temperatures (30-90°C) and pH 7.5 for 0.5-5h. The resulting samples were centrifuged, and the supernatant was tested by HPLC.
Production of GlcN in 3-L Bioreactor
The production of GlcN was performed in 3-L bioreactor (BioFlo 115, New Brunswick Scientific Co., USA) using a 1.4-L reaction mixture. Reactions were performed using the standard whole-cell biocatalytic and the conditions based on the optimal conditions in shaking flask, as described above. Agitation was provided by 2 6-bladed disk turbines. The pH was automatically kept at 7.5 via the addition of 5 M NaOH, and the temperature was maintained at 40°C. The aeration rate and agitation speed were 1.5 vvm and 300 rpm, respectively.
The Stability of GlcN and GlcNAc under the Conversion Conditions
The determination of GlcN and GlcNAc stability is carried out under the optimal conversion conditions. The conditions were 40°C, pH 7.5 (50 mM sodium phosphate buffer) and 50 g/l GLcNAc for incubating 0-5 h without cells. As for the stability of GlcN, the experiments were performed at 40°C, pH 7.5 (50 mM sodium phosphate buffer) and 50 g/l GLcN for 0-5 h without cells. The concentration of GlcN and GlcNAc were measured every 1 h to construct the stability curve were tested by HPLC.
Analytical Methods
GlcN were quantified by HPLC (Agilent1260 series, USA) on a Thermo ODS-2 HYPERSIL C18 column (250 mm × 4.0 mm, USA) by the
Sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) was performed on a 10% running gel (Bio-Rad Laboratories, USA). The target proteins were released from the cells by sonication, then, samples were incubated in denaturing buffer at 100 40°C for 10 min. The prepared samples and marker were loaded into wells and separated by electrophoresis in MES SDS running buffer, and resolved proteins were visualized by staining with Coomassie Brilliant Blue G250.
Protein concentration was measured by Bradford method (Bradford 1976) using bovine serum albumin as the standard.
The biocatalyst activity was calculated according to the following equation:
Activity = C(GlcN)/(DCW × T)
where C(GlcN) is the concentration (g/l) of GlcN that was generated by the reaction, DCW is expressed in g/l, and T denotes reaction time (min).
The reaction rate is expressed as
Reaction rate = C(GlcN)/T
where C(GlcN) is the concentration (g/l) of GlcN that was generated by the reaction, and T represents reaction time (h).
The conversion yield is given by
Conversion ratio (%) = (M2/M1) × 100
where M1 is the amount (mmol) of GlcNAc before transformation, M2 is the amount of GlcN that was generated by the reaction.
Statistical Analysis
All the experiments were conducted at least three times, and the results were expressed as mean ± standard deviation (
Results and Discussion
Expression of Diacetylchitobiose Deacetylase in B. subtilis and E. coli
The Dacph gene (from
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Figure 2. SDS-PAGE and deacetylase activity analysis of recombinant strains. (A) SDS-PAGE analysis of Dacph expression in the recombinant strains. M: protein marker, 1:
E. coli -Control (harboring blank pET-28a (+) plasmid); 2:E. coli -Dac (expressing Dacph enzyme inE. coli BL21(DE3)); 3:B. subtilis -control (harboring blank pP43NMK plasmid); 4:B. subtilis -Dac (expressing Dacph enzyme inB. subtilis WB600). (B) Comparison of the whole-cell biocatalytic deacetylase activity of recombinantE. coli BL21(DE3) andB. subtilis WB600 expressing Dacph enzyme.E. coli -Control, harboring blank pET-28a(+) plasmid;B. subtilis -control, harboring blank pP43NMK plasmid;E. coli -Dac, expressing Dacph enzyme inE. coli BL21(DE3);B. subtilis -Dac, expressing Dacph enzyme inB. subtilis WB600; The data shown are mean values from triplicates with error bars indicating the standard deviation.
The Influence of Dacph Overexpression on Cell Growth
Next, we determined whether the expression of Dacph affects cell growth of
Effects of Key Variables on GlcN Production by the Whole-Cell Biocatalysts
The enzymatic properties were evaluated to optimize the key variables of GlcN production by each whole-cell biocatalyst. The effects of pH on GlcN production were evaluated by analyzing the whole-cell biocatalyst reaction rate in Na2HPO4–NaH2PO4 buffers at pH levels ranging from 5.0 to 9.0 (Fig. 3A). The highest biocatalyst reaction rate (17.9 g·l−1·h−1) was obtained when bioconversion was performed at pH 7.5, generally in agreement with one report showing that the optimal pH for GlcNAc catalysis is 8.0 [13]. The effect of the biocatalyst concentration on biocatalyst reaction rate was evaluated next. The highest reaction rate was 17.8 g·l−1·h−1 at 18.6 g/l cells Meaning needs verification (Fig. 3B). To determine the optimal substrate concentration for bioconversion, the reactions were run at GlcNAc concentrations ranging from 10 to 80 g/l. The highest reaction rate was 18.9 g·l−1·h−1 at 50 g/l substrate (Fig. 3C). Fig. 3D shows the influence of reaction temperatures ranging from 30°C to 90°C. The reaction rate increased with the increase of temperature. The highest reaction rate was 49.6 g·l−1·h−1 at 80°C. This finding is consistent with results of a report showing that Dacph has excellent thermal stability, retaining activity at 85°C for more than 30 min [21]. Product inhibition of Dacph was assessed by measuring GlcN production. The biocatalyst reaction rate decreased sharply as GlcN concentration increased (Fig. S3).
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Figure 3. The effect of pH, DCW, substrate and temperature on whole-cell biotransformation. (A) The reaction was conducted at 30°C in sodium phosphate buffer (pH 5.0-9.0) containing 50 g/l GlcNAc. (B) The reaction was performed at the condition of 50 g/l GlcNAc, 30°C, and pH 7.5. (C) The reaction was conducted at pH 7.5, 30°C, with the GlcNAc concentrations ranging from 10 to 80 g/l. (D) The reaction was carried out at pH 7.5, with temperatures varying between 30°C and 90°C. Results were obtained with recombinant
B. subtilis whole-cell biocatalyst. The data shown are mean values from triplicates with error bars indicating the standard deviation.
The stability of GlcN was influenced by the temperature and pH. According to one study, the degradation of GlcN increases with the increasing temperature and pH [8]. As shown in Fig. 3, we measured the GlcN concentration in the reaction system to construct the curve of yield of GlcN over time at different conversion temperatures (ranging from 30°C to 90°C).
According to the Fig. 3D, the highest reaction rate was 49.6 g·l−1·h−1 when the temperature was higher than 50°C. But as shown in Fig. 4, the yield of GlcN decreased sharply at higher temperatures. Therefore, this bioconversion wasted a lot of GlcN when performed at a higher temperature. This phenomenon is reasonable. One possible explanation for the phenomenon is that the stability of GlcN was obviously influenced by the temperature at pH 7.5; the degradation of GlcN increases with the increasing temperature. When the reaction was performed at a higher temperature, the production of GlcN occurs at a higher reaction rate. However, the GlcN, deacetyled from GlcNAc, was unstable in the current high temperature environment, and can be converted into other derivatives. As shown in Fig. 4, the yield of GlcN steadily increased when the reaction temperature was lower than 40°C.
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Figure 4. Time profile of the GlcN production (g/l) under different reaction temperatures (30-90°C). Symbol denotes: ■, 30°C; ●, 40°C; ▲, 50°C; ▼, 60°C; ◆, 70°C; ○, 80°C; □, 90°C. Results were obtained with recombinant
B. subtilis whole-cell biocatalyst. The reactions were conducted at pH 7.5 in sodium phosphate buffer containing 50 g/l GlcNAc and 18.6 g/l cells. The data shown are mean values from triplicates with error bars indicating the standard deviation.
In addition, we measured the stability of substrate (GlcNAc) and product (GlcN) under the optimal bioconversion conditions, the experiments were carried out with standard substrate and product in the reaction buffer solution (50 mM sodium phosphate buffer, pH 7.5) without cells at 40°C. According to the Fig. S4, the substrate (GlcNAc) was stable at the optimal bioconversion conditions. When the incubation time was 3 h, the end of biocatalytic production of GlcN, the concentration of GlcNAc decreased from 50 to 49.3 g/l and only 1.4% reduction. When the incubation time was extended to 5 h, the concentration of GlcNAc was 48.6 g/l and decreased by 2.8%. As shown in Fig. S4, under the optimal reaction conditions, the GlcN was relatively stable in the first 3 h. The concentration of GlcN decreased from 50 to 48.1 g/l and only 3.8% reduction. When the incubation time was extended, the concentration of GlcN decreased rapidly, the concentration of GlcN was 40.75 g/l at 5 h and decreased by 18.9%.
Production of GlcN by the Whole-Cell Biocatalysts
To use the whole-cell biocatalyst for GlcN production, the conversion ratio and the yield of GlcN were evaluated under different conditions. According to the above data, we obtained 30.2 g/l GlcN when the reaction was performed at 40°C, pH 7.5, 18.6 g/l cells, and 50 g/l GlcNAc in 250-ml shaking flask. In order to optimize the reaction time and determine the trend of pH in the catalytic system, bioconversion was evaluated in a shaking flask containing 18.6 g/l cells and 50 g/l GlcNAc at 40°C and pH 7.5. The highest yield of GlcN was obtained at 3 h and then decreased. The pH value in the catalytic system was gradually decreased from 7.5 to 6.3. For the conversion efficiency and economical industrial application, 3 h seems to be the ideal operation duration. Overall, the optimal conditions were 18.6 g/l cells at 40°C, pH 7.5 for 3 h (Fig. 5A).
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Figure 5. Time profile of various parameters in different catalytic systems. (A) Time course of GlcNproduction (■) and pH value (△) catalyzation in a 250-ml shaking flask. Results were obtained with recombinant
B. subtilis whole-cell biocatalyst. The reaction was performed at 40°C in sodium phosphate buffer (pH 7.5) containing 50 g/l GlcNAc and 18.6 g/l cells. The data shown are mean values from triplicates with error bars indicating the standard deviation. (B) Time profile of various substances concentrations in the 3-L bioreactor catalytic system. The reaction was performed in 3-L bioreactor under the optimal conditions. The pH was automatically kept at 7.5 via the addition of 5 M NaOH, and the temperature was maintained at 40°C. Results were obtained with recombinantB. subtilis whole-cell biocatalyst. The data shown are mean values from triplicates with error bars indicating the standard deviation.
To attain a higher titer of GlcN, amplification experiments of GlcN production were carried out in 3-L bioreactor based on the optimal conditions in shaking flask. The concentration of various substances in the catalytic system varies with time were determined. The trend was generally consistent with shaking flask. The highest yield of GlcN (35.3 g/l) was obtained at 3 h and then decreased (Fig. 5B). The yield of GlcN and conversion ratio in 3-L bioreactor were improved, where environmental conditions are well-controlled. The maximal titer of GlcN increased from 30.2 to 35.3 g/l, and the molar conversion ratio of GlcNAc to GlcN increased from 74.7% to 86.8% (Fig. 6).
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Figure 6. Comparison of the GlcNproduction during the conversion between catalyzed in 3-L bioreactor (□) and 250-ml shaking flask (△). Both reactions were performed under the optimal conditions, 40°C, pH 7.5, 18.6 g/l cells and 50 g/l GlcNAc. The data shown are mean values from triplicates with error bars indicating the standard deviation.
In summary, we successfully devised a whole-cell biotransformation method for GlcN production by expressing diacetylchitobiose deacetylase from
Supplemental Materials
Acknowledgments
This work was financially supported by the National Outstanding Youth Foundation (31622001), 863 Program (2014AA021200, 2014AA021201), 111 project (111-2-06) and the China Postdoctoral Science Foundation (2018M630523).
Conflict of Interest
The authors have no financial conflicts of interest to declare.
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Table 1 . Strains, plasmids, and primers used in this study..
Strain, plasmid or primer Description or sequence (5’-3’) Source Strains E. coli JM109Cloning strain Takara, Ostu, Japan E. coli BL21(DE3)Expression strain Invitrogen,Carlsbad, CA B. subtilis WB600Expression strain Lab stock E. coli -DacE. coli BL21(DE3) containing a pET-28a-DacThis work B. subtilis -DacB. subtilis WB600 containing a pP43NMK-DacThis work Plasmids pET-28a(+) Kanr Invitrogen, Carlsbad, CA pP43NMK Kanr ; Ampr Virginia Tech, USA pET-28a-Dac pET-28a(+) containing Dac This work pP43NMK-Dac pP43NMK containing Dac This work Primers Dacph-F1 GTGGACAGCAAATGGGTCGC GGATCC ATGGTAGTGAACATGTTCGAAGDacph-R1 CAGTGGTGGTGGTGGTGGTG CTCGAG GATAAGGTCAGTAAACGGTGTDacph-F2 GTAAAATATAAAGTGATAGC GGTACC ATTATAGGTAAGAGAGGAATDacph-R2 ACCATGATTACGCCAAGCTT CTGCAG TCAGATCAGGTCCGTAAACGAmpr, ampicillin resistance; Kanr, kanamycin resistance..
Italic letters represent the restriction enzyme sites, and underlined letters represent homologous sequences for cloning..
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