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Research article
Effective Platform for the Production of Recombinant Outer Membrane Vesicles in Gram-Negative Bacteria
Chulabhorn International College of Medicine, Thammasat University, Pathumthani 12120, Thailand
Correspondence to:J. Microbiol. Biotechnol. 2022; 32(5): 621-629
Published May 28, 2022 https://doi.org/10.4014/jmb.2003.03023
Copyright © The Korean Society for Microbiology and Biotechnology.
Abstract
Keywords
Introduction
Outer membrane vesicles (OMVs) are closed, spherical lipid bilayer structures that are released naturally and constitutively from gram-negative bacteria during their growth. These nanostructures play significant roles in many physiological and pathological processes of the bacteria that correspond to cell proliferation and survival [1, 2]. Pathogenic bacteria use OMVs as a secretion and delivery system to disseminate toxins, virulence factors, and other active biomolecules to host cells to help carry out host cell invasion and initiate the infection [3]. Since OMVs are derived from bacterial membranes, they are enriched in elements that are similar to those presented in the outer membranes of their parent cells, such as outer membrane proteins, antigens, virulence factors, toxins, and lipids, as well as inner membrane and periplasmic components [4]. Upon binding to host cells, the delivery of antigens, virulence factors, and other immunomodulatory molecules to the cells not only initiates the infection but also induces an inflammatory cascade and protective immune responses against the pathogens [3].
Owing to their unique characteristics and the presence of intrinsic immunostimulatory components, these nanovesicles can potentially be used as vaccine antigens and adjuvants. OMV-based vaccines have been developed and tested for their efficacy against many bacterial diseases [5]. The meningococcal group B OMV vaccine is an explicit example of using bacterial OMVs as a vaccine antigen. It is currently the only FDA-approved OMV-based vaccine available on the market (known as Bexsero) and includes recombinant neisserial antigens in its formulation [6]. This vaccine preparation was able to generate specific immune responses towards the antigens and conferred greater than 70% protection [7]. OMV-based vaccines are superior to their whole-cell or attenuated counterparts in terms of vaccine safety because these subcellular nanoparticles are noninfectious and non-replicable. Most OMVs that have thus far been tested in vaccine efficacy studies (either in vitro or in vivo) are derived from the isolation of homologous vesicles from corresponding bacterial species through various methods [8]. These methods include direct isolation of the vesicles from cell-free culture media, yielding natural spontaneously released OMVs (sOMVs) as well as detergent-dependent and detergent-free extractions of OMVs from concentrated cells, yielding detergent-derived OMVs (dOMVs) and native OMVs (nOMVs), respectively [9]. Depending on the production method, biomaterials incorporated into the OMVs can vary in their protein and lipid compositions. In addition, the composition of OMVs can be affected by the growth phase, media components, or a specific stress signal [10, 11].
While homologous OMVs are increasingly attractive in the field of vaccine development, their production has some drawbacks; for example, productivity and the biocomposition of the isolated vesicles vary among growth conditions and depend on several factors [12, 13]. Therefore, the number of antigens and immunogenic molecules present within the vesicles can be inconsistent. Furthermore, some bacterial species require special media or growth conditions, which could adversely affect the production process, time, and cost for future clinical use. To overcome these limitations, recombinant OMVs (rOMVs) have been developed. Biotechnological advancements have made it possible to create OMVs that are decorated with heterologous antigenic protein(s) of interest in bacterial host species. By constructing a protein expression vector that contains the desired sequence along with the proper leading signal and introducing that recombinant vector into bacterial host cells, heterologous target proteins can be produced and displayed on the outer membrane and released as part of the rOMVs, which can subsequently be isolated from the culture media. As yet, there is no effective method that uses bacterial host systems to generate rOMVs with the incorporation of heterologous proteins. Therefore, the aim of this study was to establish the technique and develop a prototype platform for the production of rOMVs in an
Materials and Methods
Bacterial Strains
Production of Heterologous gfpmut2 Sequence Combined with Bacterial Type II or Lipoprotein Signal Peptide
N-terminal sequences that included the signal peptide of three bacterial lipoproteins were selected and fused with the mature sequence of
Construction of Recombinant Plasmid Expressing GFPmut2
Full-length heterologous
To create recombinant plasmid expressing GFPmut2, double digestion of the
Transformation of the recombinant pET-22b plasmids into
Following sequence validation, the recombinant pET-22b plasmids carrying
Expression of Recombinant GFPmut2
A small-scale pilot protein expression study was initially completed to explore whether recombinant GFPmut2 was produced in the Lemo21(DE3) cells and, if so, to identify the optimal conditions for protein expression that yielded the highest level of protein production. The concentration of L-rhamnose, an inducer of T7 lysozyme production, was varied in the pilot expression studies, while the concentration of isopropyl β-D-1-thiogalactopyranoside (IPTG) was kept constant throughout the experiments.
Forty-five milliliters of LB broth+ampicillin100+chloramphenicol30 was inoculated with 1 ml of freshly grown Lemo21(DE3) starter culture harboring recombinant plasmids and was cultured at 30°C until the optical density at 600 nm (OD600) reached 0.4–0.8 (mid-log phase). The original culture was then divided into four 10-ml cultures: one for the uninduced control and the other three for recombinant GFPmut2 production in which the expression was induced by adding 40 μl of 0.1 M IPTG (final concentration 400 μM) and varying the final L-rhamnose concentration (500, 1,000, or 2,000 μM). All cultures were maintained at 30°C overnight. The following morning, the cultures were centrifuged at 6,000 ×
For the large-scale recombinant protein production, 500 ml of LB broth+ampicillin100+chloramphenicol30 was inoculated with 5 ml of freshly grown starter culture (1:10 ratio). When the OD600 reached 0.4–0.8, the optimal concentration of L-rhamnose (as determined in the pilot study) and 400 μM IPTG were applied to induce recombinant GFPmut2 expression. The culture was then grown at 30°C overnight. On the following day, the cells were separated from the culture media by centrifugation at 6,000 ×
Isolation and Purification of rOMVs
Isolation of the rOMVs carrying GFPmut2 was achieved following a previously described protocol [18] with minor modifications. The supernatant fraction from the previous centrifugation step was filtered through a Rapid-Flow sterile disposable filter unit made of polyethersulfone (PES) with 0.45 μm pore size (Thermo Scientific, USA). The culture filtrate was then concentrated by ultrafiltration (centrifugation at 5,000 ×
Detection and Characterization of Heterologous GFPmut2 Incorporated into the OMVs
The protein concentrations of the culture filtrate, concentrated culture filtrate, supernatant from the ultracentrifugation step, and the resuspended OMV solution were measured with a DC protein assay following the manufacturer’s microplate assay protocol (Bio-Rad) using bovine serum albumin as the protein standard. The resuspended OMV solution and the aforementioned samples and whole-cell lysate from the pilot study were equally loaded (approximately 35 μg/well) and subjected to 12% SDS-PAGE to detect the presence of target protein in the rOMVs. Proteins in the gels were visualized by Coomassie blue staining and the putative size of the target protein was compared with the Precision Plus Protein Prestained Dual Color Standard (Bio-Rad). To confirm the incorporation of polyhistidine-tagged recombinant GFPmut2 within the OMVs, the separated proteins were analyzed by Western blot. The proteins were transferred from the gel to a membrane and mouse anti-6xHis monoclonal antibody (mAb) [1:5,000 diluted in 5% skim milk in 0.2% Tris-buffered saline with Tween-20 (TBST); R&D Systems, Inc., USA] was used as the primary antibody to label the recombinant GFPmut2, which contained six histidine molecules at its C-terminus. The membrane was then incubated with rabbit anti-mouse IgG conjugated to horseradish peroxidase (1:10,000 diluted in 5% skim milk in 0.2% TBST; Abcam, UK). The chemiluminescence signal was developed using Amersham ECL Prime Western Blotting Detection Reagent following the manufacturer’s protocol (GE Healthcare Life Sciences) and captured by an Amersham Imager 600 Blot and Gel Imager using the automatic mode and a 30-sec exposure time.
rOMV Imaging by Transmission Electron Microscopy (TEM)
A 10-μl droplet of diluted rOMV solution (1:5 in PBS) was placed on a 400-mesh copper grid and incubated for 10 min at room temperature. The grids were washed once with deionized water, and the samples were then stained with 2% uranyl acetate for 1 min. Excessive uranyl acetate was removed with filter paper. After grid desiccation, images of the OMVs were taken under a Hitachi HT7700 transmission electron microscope at Kasetsart University Research and Development Institute (KURDI, Kasetsart University, Thailand) at an accelerating voltage of 100 kV.
Results
Recombinant Plasmid Constructs Carrying lipo-gfpmut2 for the Expression of Outer Membrane GFPmut2
The synthetic DNA fragments used in the current study were designed to include the restriction sites of NdeI at the 5′ end, BamHI at the junction between the lipoprotein signal peptide and the mature
Type II signal peptides including their Lol (lipoprotein outer membrane localization) sorting signals (amino acid at position +2, +3, and +4 after +1 cysteine residue of the conserved lipobox) and tether sequences of three well-characterized bacterial outer membrane lipoproteins, fHpb, LipL32, and JlpA, were merged upstream to the mature
-
Fig. 1. Schematic representation of heterologous
lipo-gfpmut2 constructs. (A)lipo-fHpb-gfpmut2 ; (B)lipo-lipL32-gfpmut2 ; (C)lipo-jlpA-gfpmut2 ; sig: signal peptide including tether sequence.
-
Fig. 2. Amino acid sequences of the lipobox and Lol sorting signals at position +2, +3, and +4 of
lipo-gfpmut2 fragments and their corresponding recombinant plasmid constructs. (A)lipo-fHpb-gfpmut2 ; (B)lipo-lipL32-gfpmut2 ; (C)lipo-jlpA-gfpmut2 .
Analysis and Expression of Heterologous GFPmut2
Putative amino acid sequences of
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Table 1 . SignalP prediction of recombinant GFPmut2 subcellular location corresponding to
lipo-gpfmut2 fragments with different signal peptide sequences.lipo-gpfmut2 fragmentLength of signal peptide (aa) Type of signal peptide Probability Cleavage site (aa position and sequence) lipo-fHpb-gfpmut2 21 Lipoprotein (Sec/SPII) 0.9940 20-21, LTA-CS lipo-lipL32-gfpmut2 21 Lipoprotein (Sec/SPII) 0.9893 20-21, ITA-CG lipo-jlpA-gfpmut2 19 Lipoprotein (Sec/SPII) 0.9997 18-19, FSA-CG aa: amino acid; Sec/SPII: type II or lipoprotein signal peptide.
-
Table 2 . Characterization of recombinant GFPmut2 expressed by the three recombinant plasmid constructs.
Plasmid name Length of target protein (aa)a MW (kDa) pI MW of lipid moiety (kDa) Estimated total MW (kDa) pfHpb-GFPmut2 264 29.4 5.86 0.7 30.1 pLipL32-GFPmut2 261 29.3 6.04 0.7 30 pJlpA-GFPmut2 256 28.9 5.86 0.7 29.6 aa: amino acid; a: includes C-terminal 6xHis tag with exclusion of N-terminal lipoprotein signal peptide; MW: molecular weight; kDa: kilodalton; pI: isoelectric point.
SDS-PAGE analysis of the whole-cell lysate proteins obtained from the pfHpb-GFPmut2, pLipL32-GFPmut2, and pJlpA-GFPmut2 expression cultures in the pilot study revealed that one of the heterologous
-
Fig. 3. SDS-PAGE analysis of whole-cell lysate proteins from the pilot study. GFPmut2 protein expression was induced with 400 μM IPTG and varied concentrations of L-rhamnose (500, 1,000, and 2,000 μM). The calculated MW of the target protein is 30 kDa. Un: uninduced culture.
-
Fig. 4. Fluorescence signal from Lemo21(DE3) cells. GFPmut2 expression in the pilot study was induced with different L-rhamnose concentrations.
Therefore, only the pfHpb-GFPmut2 construct progressed to large-scale expression culture to produce recombinant OMVs. GFPmut2 production in Lemo21(DE3) cells was induced with 400 μM IPTG and 2,000 μM L-rhamnose. The total protein concentration of OMVs extracted from cell-free culture media was assessed with a DC protein assay and was found to be 4.5 μg/μl. Thus, the total OMV protein yield was approximately 4 mg/500 ml culture.
Identification and Characterization of Heterologous GFPmut2 Incorporated into rOMVs
SDS-PAGE followed by Coomassie blue staining of total OMV proteins revealed a number of proteins with a wide molecular mass range (approximately 25 to 150 kDa). The most distinct band was located between 25 and 37 kDa (Fig. 5A, lane 5), which matched the putative size of GFPmut2 including the polyhistidine tag (30 kDa). Fig. 5B shows a strong chemiluminescence signal at the putative size of the target protein (between 25 and 37 kDa) in the Western blot of total OMV protein using anti-His mAb as the primary antibody. The same signal, but weaker, was also detected in the whole-cell lysate sample from the small-scale expression study under the same culture conditions. The strong intensity of the protein band seen in both the Coomassie blue-stained acrylamide gel and on the blotting membrane indicated successful overexpression of the target protein in this system.
-
Fig. 5. (A) SDS-PAGE and (B) Western blot analyses of total proteins from large-scale recombinant protein production. Lane 1: whole-cell lysate proteins from the pilot study, culture was induced with 2,000 μM L-rhamnose; 2: culture filtrate; 3: concentrated culture filtrate; 4: ultracentrifugation supernatant; 5: resuspended OMVs.
Visualization of rOMVs
Visualization of the rOMVs under TEM confirmed that the nanoparticles produced and extracted using the current platform were hollow, closed spherical structures with diameters varying from 20 to 200 nm. While most of the vesicles were enclosed by a single membrane corresponding to the bilayer outer membrane of the host cell and shared similar electron micrograph characteristics to previously examined vesicles [18, 19], a small number of vesicles were found to have double membranes. The exterior sheet stemmed from the outer membrane of the bacteria, and the interior lamina was derived from the cytoplasmic membrane (Fig. 6).
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Fig. 6. TEM images of the OMV pellets acquired by ultracentrifugation of concentrated culture media. (A) 20,000× magnification shows that the majority of rOMVs were hollow, single-membrane spherical structures. Arrows indicate vesicles encased in double membranes. (B) rOMVs at the higher magnification (inset).
Discussion
Over the past decade, OMVs from gram-negative bacteria, either in their native or detergent-extracted form, have been applied in vaccine development [20]. They have been used not only as antigen delivery vehicles to the host and as the antigens themselves but also as potential intrinsic vaccine adjuvants. This ability is due to the presence of multiple immunogenic molecules that can potentiate the innate immune response, leading to stronger specific immune responses toward the antigens of interest [5]. Owing to their immunological features and clinical success, especially in the case of Bexsero®, attempts have been made to develop new vaccines. However, some extraction methods lead to OMVs that contain lower amounts of possible immunogenic proteins when compared to OMVs that are spontaneously released [21]. Thus, studies have attempted to build systems to produce recombinant bioengineered OMVs that display the desired vaccine antigens to overcome this issue. These attempts have been carried out in multiple gram-negative bacteria, including
In the current study, the key concept of platform development for rOMV production is to enable the
After the target gene is translated to protein, Sec translocation machinery of the bacteria recognize the lipoprotein signal peptide at the N terminus of the recombinant protein (in the form of lipoprotein precursor) and transport the protein across cytoplasmic membrane to the periplasmic surface [27]. At this location, the precursor protein is lipid-modified at the +1 cysteine residue of the conserved lipobox and becomes a mature lipoprotein through the action of several enzymes (preprolipoprotein diacylglyceryl transferase, lipoprotein signal peptidase, and apolipoprotein N-acyltransferase) [28]. Due to the absence of aspartate amino acid at position +2, a so-called Lol avoidance signal, the mature lipidated target protein is localized to the outer membrane by the Lol pathway proteins [29] and is likely to be included in the OMVs. This is why three different signal peptides were selected for investigation, two from surface-exposed gram-negative bacterial lipoproteins and one from a subsurface spirochetal lipoprotein.
Of the three constructs used in this study, the plasmid carrying
When all three lipoprotein signal peptides including their amino acids at position +2 and +3 were compared to those of Lpp protein, the major outer membrane lipoprotein of
-
Fig. 7. Comparison of lipobox sequences and Lol sorting signals between an
E. coli major outer membrane lipoprotein, Lpp, and the 3 heterologouslipo-gfpmut2 constructs. (A)lipo-fHpb-gfpmut2 ; (B)lipo-lipL32-gfpmut2 ; (C)lipo-jlpA-gfpmut2 .
In conclusion, this study provided evidence that the lipoprotein signal peptide of fHbp, a surfaced-exposed lipoprotein of
Acknowledgments
The authors gratefully acknowledge the financial support provided by Thammasat University Research Fund under the TU Research Scholar, Contract no. 2/45/2560. We also greatly thank Asst. Prof. Veerachai Thitapakorn for providing administrative assistance.
Conflict of Interest
The authors have no financial conflicts of interest to declare.
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Related articles in JMB

Article
Research article
J. Microbiol. Biotechnol. 2022; 32(5): 621-629
Published online May 28, 2022 https://doi.org/10.4014/jmb.2003.03023
Copyright © The Korean Society for Microbiology and Biotechnology.
Effective Platform for the Production of Recombinant Outer Membrane Vesicles in Gram-Negative Bacteria
Anthicha Kunjantarachot* and Teva Phanaksri
Chulabhorn International College of Medicine, Thammasat University, Pathumthani 12120, Thailand
Correspondence to:anthik@tu.ac.th
Abstract
Bacterial outer membrane vesicles (OMVs) typically contain multiple immunogenic molecules that include antigenic proteins, making them good candidates for vaccine development. In animal models, vaccination with OMVs has been shown to confer protective immune responses against many bacterial diseases. It is possible to genetically introduce heterologous protein antigens to the bacterial host that can then be produced and relocated to reside within the OMVs by means of the host secretion mechanisms. Accordingly, in this study we sought to develop a novel platform for recombinant OMV (rOMV) production in the widely used bacterial expression host species, Escherichia coli. Three different lipoprotein signal peptides including their Lol signals and tether sequences—from Neisseria meningitidis fHbp, Leptospira interrogans LipL32, and Campylobactor jejuni JlpA—were combined upstream to the GFPmut2 model protein, resulting in three recombinant plasmids. Pilot expression studies showed that the fusion between fHbp and GFPmut2 was the only promising construct; therefore, we used this construct for large-scale expression. After inducing recombinant protein expression, the nanovesicles were harvested from cell-free culture media by ultrafiltration and ultracentrifugation. Transmission electron microscopy demonstrated that the obtained rOMVs were closed, circular single-membrane particles, 20–200 nm in size. Western blotting confirmed the presence of GFPmut2 in the isolated vesicles. Collectively, although this is a non-optimized, proof-of-concept study, it demonstrates the feasibility of this platform in directing target proteins into the vesicles for OMV-based vaccine development.
Keywords: Recombinant outer membrane vesicles, gram-negative bacteria, lipoprotein signal peptide, platform
Introduction
Outer membrane vesicles (OMVs) are closed, spherical lipid bilayer structures that are released naturally and constitutively from gram-negative bacteria during their growth. These nanostructures play significant roles in many physiological and pathological processes of the bacteria that correspond to cell proliferation and survival [1, 2]. Pathogenic bacteria use OMVs as a secretion and delivery system to disseminate toxins, virulence factors, and other active biomolecules to host cells to help carry out host cell invasion and initiate the infection [3]. Since OMVs are derived from bacterial membranes, they are enriched in elements that are similar to those presented in the outer membranes of their parent cells, such as outer membrane proteins, antigens, virulence factors, toxins, and lipids, as well as inner membrane and periplasmic components [4]. Upon binding to host cells, the delivery of antigens, virulence factors, and other immunomodulatory molecules to the cells not only initiates the infection but also induces an inflammatory cascade and protective immune responses against the pathogens [3].
Owing to their unique characteristics and the presence of intrinsic immunostimulatory components, these nanovesicles can potentially be used as vaccine antigens and adjuvants. OMV-based vaccines have been developed and tested for their efficacy against many bacterial diseases [5]. The meningococcal group B OMV vaccine is an explicit example of using bacterial OMVs as a vaccine antigen. It is currently the only FDA-approved OMV-based vaccine available on the market (known as Bexsero) and includes recombinant neisserial antigens in its formulation [6]. This vaccine preparation was able to generate specific immune responses towards the antigens and conferred greater than 70% protection [7]. OMV-based vaccines are superior to their whole-cell or attenuated counterparts in terms of vaccine safety because these subcellular nanoparticles are noninfectious and non-replicable. Most OMVs that have thus far been tested in vaccine efficacy studies (either in vitro or in vivo) are derived from the isolation of homologous vesicles from corresponding bacterial species through various methods [8]. These methods include direct isolation of the vesicles from cell-free culture media, yielding natural spontaneously released OMVs (sOMVs) as well as detergent-dependent and detergent-free extractions of OMVs from concentrated cells, yielding detergent-derived OMVs (dOMVs) and native OMVs (nOMVs), respectively [9]. Depending on the production method, biomaterials incorporated into the OMVs can vary in their protein and lipid compositions. In addition, the composition of OMVs can be affected by the growth phase, media components, or a specific stress signal [10, 11].
While homologous OMVs are increasingly attractive in the field of vaccine development, their production has some drawbacks; for example, productivity and the biocomposition of the isolated vesicles vary among growth conditions and depend on several factors [12, 13]. Therefore, the number of antigens and immunogenic molecules present within the vesicles can be inconsistent. Furthermore, some bacterial species require special media or growth conditions, which could adversely affect the production process, time, and cost for future clinical use. To overcome these limitations, recombinant OMVs (rOMVs) have been developed. Biotechnological advancements have made it possible to create OMVs that are decorated with heterologous antigenic protein(s) of interest in bacterial host species. By constructing a protein expression vector that contains the desired sequence along with the proper leading signal and introducing that recombinant vector into bacterial host cells, heterologous target proteins can be produced and displayed on the outer membrane and released as part of the rOMVs, which can subsequently be isolated from the culture media. As yet, there is no effective method that uses bacterial host systems to generate rOMVs with the incorporation of heterologous proteins. Therefore, the aim of this study was to establish the technique and develop a prototype platform for the production of rOMVs in an
Materials and Methods
Bacterial Strains
Production of Heterologous gfpmut2 Sequence Combined with Bacterial Type II or Lipoprotein Signal Peptide
N-terminal sequences that included the signal peptide of three bacterial lipoproteins were selected and fused with the mature sequence of
Construction of Recombinant Plasmid Expressing GFPmut2
Full-length heterologous
To create recombinant plasmid expressing GFPmut2, double digestion of the
Transformation of the recombinant pET-22b plasmids into
Following sequence validation, the recombinant pET-22b plasmids carrying
Expression of Recombinant GFPmut2
A small-scale pilot protein expression study was initially completed to explore whether recombinant GFPmut2 was produced in the Lemo21(DE3) cells and, if so, to identify the optimal conditions for protein expression that yielded the highest level of protein production. The concentration of L-rhamnose, an inducer of T7 lysozyme production, was varied in the pilot expression studies, while the concentration of isopropyl β-D-1-thiogalactopyranoside (IPTG) was kept constant throughout the experiments.
Forty-five milliliters of LB broth+ampicillin100+chloramphenicol30 was inoculated with 1 ml of freshly grown Lemo21(DE3) starter culture harboring recombinant plasmids and was cultured at 30°C until the optical density at 600 nm (OD600) reached 0.4–0.8 (mid-log phase). The original culture was then divided into four 10-ml cultures: one for the uninduced control and the other three for recombinant GFPmut2 production in which the expression was induced by adding 40 μl of 0.1 M IPTG (final concentration 400 μM) and varying the final L-rhamnose concentration (500, 1,000, or 2,000 μM). All cultures were maintained at 30°C overnight. The following morning, the cultures were centrifuged at 6,000 ×
For the large-scale recombinant protein production, 500 ml of LB broth+ampicillin100+chloramphenicol30 was inoculated with 5 ml of freshly grown starter culture (1:10 ratio). When the OD600 reached 0.4–0.8, the optimal concentration of L-rhamnose (as determined in the pilot study) and 400 μM IPTG were applied to induce recombinant GFPmut2 expression. The culture was then grown at 30°C overnight. On the following day, the cells were separated from the culture media by centrifugation at 6,000 ×
Isolation and Purification of rOMVs
Isolation of the rOMVs carrying GFPmut2 was achieved following a previously described protocol [18] with minor modifications. The supernatant fraction from the previous centrifugation step was filtered through a Rapid-Flow sterile disposable filter unit made of polyethersulfone (PES) with 0.45 μm pore size (Thermo Scientific, USA). The culture filtrate was then concentrated by ultrafiltration (centrifugation at 5,000 ×
Detection and Characterization of Heterologous GFPmut2 Incorporated into the OMVs
The protein concentrations of the culture filtrate, concentrated culture filtrate, supernatant from the ultracentrifugation step, and the resuspended OMV solution were measured with a DC protein assay following the manufacturer’s microplate assay protocol (Bio-Rad) using bovine serum albumin as the protein standard. The resuspended OMV solution and the aforementioned samples and whole-cell lysate from the pilot study were equally loaded (approximately 35 μg/well) and subjected to 12% SDS-PAGE to detect the presence of target protein in the rOMVs. Proteins in the gels were visualized by Coomassie blue staining and the putative size of the target protein was compared with the Precision Plus Protein Prestained Dual Color Standard (Bio-Rad). To confirm the incorporation of polyhistidine-tagged recombinant GFPmut2 within the OMVs, the separated proteins were analyzed by Western blot. The proteins were transferred from the gel to a membrane and mouse anti-6xHis monoclonal antibody (mAb) [1:5,000 diluted in 5% skim milk in 0.2% Tris-buffered saline with Tween-20 (TBST); R&D Systems, Inc., USA] was used as the primary antibody to label the recombinant GFPmut2, which contained six histidine molecules at its C-terminus. The membrane was then incubated with rabbit anti-mouse IgG conjugated to horseradish peroxidase (1:10,000 diluted in 5% skim milk in 0.2% TBST; Abcam, UK). The chemiluminescence signal was developed using Amersham ECL Prime Western Blotting Detection Reagent following the manufacturer’s protocol (GE Healthcare Life Sciences) and captured by an Amersham Imager 600 Blot and Gel Imager using the automatic mode and a 30-sec exposure time.
rOMV Imaging by Transmission Electron Microscopy (TEM)
A 10-μl droplet of diluted rOMV solution (1:5 in PBS) was placed on a 400-mesh copper grid and incubated for 10 min at room temperature. The grids were washed once with deionized water, and the samples were then stained with 2% uranyl acetate for 1 min. Excessive uranyl acetate was removed with filter paper. After grid desiccation, images of the OMVs were taken under a Hitachi HT7700 transmission electron microscope at Kasetsart University Research and Development Institute (KURDI, Kasetsart University, Thailand) at an accelerating voltage of 100 kV.
Results
Recombinant Plasmid Constructs Carrying lipo-gfpmut2 for the Expression of Outer Membrane GFPmut2
The synthetic DNA fragments used in the current study were designed to include the restriction sites of NdeI at the 5′ end, BamHI at the junction between the lipoprotein signal peptide and the mature
Type II signal peptides including their Lol (lipoprotein outer membrane localization) sorting signals (amino acid at position +2, +3, and +4 after +1 cysteine residue of the conserved lipobox) and tether sequences of three well-characterized bacterial outer membrane lipoproteins, fHpb, LipL32, and JlpA, were merged upstream to the mature
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Figure 1. Schematic representation of heterologous
lipo-gfpmut2 constructs. (A)lipo-fHpb-gfpmut2 ; (B)lipo-lipL32-gfpmut2 ; (C)lipo-jlpA-gfpmut2 ; sig: signal peptide including tether sequence.
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Figure 2. Amino acid sequences of the lipobox and Lol sorting signals at position +2, +3, and +4 of
lipo-gfpmut2 fragments and their corresponding recombinant plasmid constructs. (A)lipo-fHpb-gfpmut2 ; (B)lipo-lipL32-gfpmut2 ; (C)lipo-jlpA-gfpmut2 .
Analysis and Expression of Heterologous GFPmut2
Putative amino acid sequences of
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Table 1 . SignalP prediction of recombinant GFPmut2 subcellular location corresponding to
lipo-gpfmut2 fragments with different signal peptide sequences..lipo-gpfmut2 fragmentLength of signal peptide (aa) Type of signal peptide Probability Cleavage site (aa position and sequence) lipo-fHpb-gfpmut2 21 Lipoprotein (Sec/SPII) 0.9940 20-21, LTA-CS lipo-lipL32-gfpmut2 21 Lipoprotein (Sec/SPII) 0.9893 20-21, ITA-CG lipo-jlpA-gfpmut2 19 Lipoprotein (Sec/SPII) 0.9997 18-19, FSA-CG aa: amino acid; Sec/SPII: type II or lipoprotein signal peptide..
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Table 2 . Characterization of recombinant GFPmut2 expressed by the three recombinant plasmid constructs..
Plasmid name Length of target protein (aa)a MW (kDa) pI MW of lipid moiety (kDa) Estimated total MW (kDa) pfHpb-GFPmut2 264 29.4 5.86 0.7 30.1 pLipL32-GFPmut2 261 29.3 6.04 0.7 30 pJlpA-GFPmut2 256 28.9 5.86 0.7 29.6 aa: amino acid; a: includes C-terminal 6xHis tag with exclusion of N-terminal lipoprotein signal peptide; MW: molecular weight; kDa: kilodalton; pI: isoelectric point..
SDS-PAGE analysis of the whole-cell lysate proteins obtained from the pfHpb-GFPmut2, pLipL32-GFPmut2, and pJlpA-GFPmut2 expression cultures in the pilot study revealed that one of the heterologous
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Figure 3. SDS-PAGE analysis of whole-cell lysate proteins from the pilot study. GFPmut2 protein expression was induced with 400 μM IPTG and varied concentrations of L-rhamnose (500, 1,000, and 2,000 μM). The calculated MW of the target protein is 30 kDa. Un: uninduced culture.
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Figure 4. Fluorescence signal from Lemo21(DE3) cells. GFPmut2 expression in the pilot study was induced with different L-rhamnose concentrations.
Therefore, only the pfHpb-GFPmut2 construct progressed to large-scale expression culture to produce recombinant OMVs. GFPmut2 production in Lemo21(DE3) cells was induced with 400 μM IPTG and 2,000 μM L-rhamnose. The total protein concentration of OMVs extracted from cell-free culture media was assessed with a DC protein assay and was found to be 4.5 μg/μl. Thus, the total OMV protein yield was approximately 4 mg/500 ml culture.
Identification and Characterization of Heterologous GFPmut2 Incorporated into rOMVs
SDS-PAGE followed by Coomassie blue staining of total OMV proteins revealed a number of proteins with a wide molecular mass range (approximately 25 to 150 kDa). The most distinct band was located between 25 and 37 kDa (Fig. 5A, lane 5), which matched the putative size of GFPmut2 including the polyhistidine tag (30 kDa). Fig. 5B shows a strong chemiluminescence signal at the putative size of the target protein (between 25 and 37 kDa) in the Western blot of total OMV protein using anti-His mAb as the primary antibody. The same signal, but weaker, was also detected in the whole-cell lysate sample from the small-scale expression study under the same culture conditions. The strong intensity of the protein band seen in both the Coomassie blue-stained acrylamide gel and on the blotting membrane indicated successful overexpression of the target protein in this system.
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Figure 5. (A) SDS-PAGE and (B) Western blot analyses of total proteins from large-scale recombinant protein production. Lane 1: whole-cell lysate proteins from the pilot study, culture was induced with 2,000 μM L-rhamnose; 2: culture filtrate; 3: concentrated culture filtrate; 4: ultracentrifugation supernatant; 5: resuspended OMVs.
Visualization of rOMVs
Visualization of the rOMVs under TEM confirmed that the nanoparticles produced and extracted using the current platform were hollow, closed spherical structures with diameters varying from 20 to 200 nm. While most of the vesicles were enclosed by a single membrane corresponding to the bilayer outer membrane of the host cell and shared similar electron micrograph characteristics to previously examined vesicles [18, 19], a small number of vesicles were found to have double membranes. The exterior sheet stemmed from the outer membrane of the bacteria, and the interior lamina was derived from the cytoplasmic membrane (Fig. 6).
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Figure 6. TEM images of the OMV pellets acquired by ultracentrifugation of concentrated culture media. (A) 20,000× magnification shows that the majority of rOMVs were hollow, single-membrane spherical structures. Arrows indicate vesicles encased in double membranes. (B) rOMVs at the higher magnification (inset).
Discussion
Over the past decade, OMVs from gram-negative bacteria, either in their native or detergent-extracted form, have been applied in vaccine development [20]. They have been used not only as antigen delivery vehicles to the host and as the antigens themselves but also as potential intrinsic vaccine adjuvants. This ability is due to the presence of multiple immunogenic molecules that can potentiate the innate immune response, leading to stronger specific immune responses toward the antigens of interest [5]. Owing to their immunological features and clinical success, especially in the case of Bexsero®, attempts have been made to develop new vaccines. However, some extraction methods lead to OMVs that contain lower amounts of possible immunogenic proteins when compared to OMVs that are spontaneously released [21]. Thus, studies have attempted to build systems to produce recombinant bioengineered OMVs that display the desired vaccine antigens to overcome this issue. These attempts have been carried out in multiple gram-negative bacteria, including
In the current study, the key concept of platform development for rOMV production is to enable the
After the target gene is translated to protein, Sec translocation machinery of the bacteria recognize the lipoprotein signal peptide at the N terminus of the recombinant protein (in the form of lipoprotein precursor) and transport the protein across cytoplasmic membrane to the periplasmic surface [27]. At this location, the precursor protein is lipid-modified at the +1 cysteine residue of the conserved lipobox and becomes a mature lipoprotein through the action of several enzymes (preprolipoprotein diacylglyceryl transferase, lipoprotein signal peptidase, and apolipoprotein N-acyltransferase) [28]. Due to the absence of aspartate amino acid at position +2, a so-called Lol avoidance signal, the mature lipidated target protein is localized to the outer membrane by the Lol pathway proteins [29] and is likely to be included in the OMVs. This is why three different signal peptides were selected for investigation, two from surface-exposed gram-negative bacterial lipoproteins and one from a subsurface spirochetal lipoprotein.
Of the three constructs used in this study, the plasmid carrying
When all three lipoprotein signal peptides including their amino acids at position +2 and +3 were compared to those of Lpp protein, the major outer membrane lipoprotein of
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Figure 7. Comparison of lipobox sequences and Lol sorting signals between an
E. coli major outer membrane lipoprotein, Lpp, and the 3 heterologouslipo-gfpmut2 constructs. (A)lipo-fHpb-gfpmut2 ; (B)lipo-lipL32-gfpmut2 ; (C)lipo-jlpA-gfpmut2 .
In conclusion, this study provided evidence that the lipoprotein signal peptide of fHbp, a surfaced-exposed lipoprotein of
Acknowledgments
The authors gratefully acknowledge the financial support provided by Thammasat University Research Fund under the TU Research Scholar, Contract no. 2/45/2560. We also greatly thank Asst. Prof. Veerachai Thitapakorn for providing administrative assistance.
Conflict of Interest
The authors have no financial conflicts of interest to declare.
Fig 1.

Fig 2.

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Fig 5.

Fig 6.

Fig 7.

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Table 1 . SignalP prediction of recombinant GFPmut2 subcellular location corresponding to
lipo-gpfmut2 fragments with different signal peptide sequences..lipo-gpfmut2 fragmentLength of signal peptide (aa) Type of signal peptide Probability Cleavage site (aa position and sequence) lipo-fHpb-gfpmut2 21 Lipoprotein (Sec/SPII) 0.9940 20-21, LTA-CS lipo-lipL32-gfpmut2 21 Lipoprotein (Sec/SPII) 0.9893 20-21, ITA-CG lipo-jlpA-gfpmut2 19 Lipoprotein (Sec/SPII) 0.9997 18-19, FSA-CG aa: amino acid; Sec/SPII: type II or lipoprotein signal peptide..
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Table 2 . Characterization of recombinant GFPmut2 expressed by the three recombinant plasmid constructs..
Plasmid name Length of target protein (aa)a MW (kDa) pI MW of lipid moiety (kDa) Estimated total MW (kDa) pfHpb-GFPmut2 264 29.4 5.86 0.7 30.1 pLipL32-GFPmut2 261 29.3 6.04 0.7 30 pJlpA-GFPmut2 256 28.9 5.86 0.7 29.6 aa: amino acid; a: includes C-terminal 6xHis tag with exclusion of N-terminal lipoprotein signal peptide; MW: molecular weight; kDa: kilodalton; pI: isoelectric point..
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