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Table. 1.

Table. 1.

Proteins of B. pseudomallei that are involved in signaling system in the regulation of biofilms.

Signaling Molecules Annotation/Description Species/isolate Sequence identity to K96243 (% identity) Burkholderia pseudomallei K96243 identifier code Protein Description for Burkholderia pseudomallei K96243 Reference
c-di-GMP Bp1026b_II2523 DGC Burkholderia pseudomallei 1026b 99.89 BPSS2342 Hypothetical protein [41,54]
Bp1026b_I2235 GGDEF domain Burkholderia pseudomallei 1026b 99.85 BPSL1306 Hypothetical protein [41,54]
Bp1026b_II0153 GGDEF domain Burkholderia pseudomallei 1026b 99.93 BPSS0136 Hypothetical protein [41,54]
Bp1026b_II1380 GGDEF domain Burkholderia pseudomallei 1026b 99.73 BPSS1297 Regulatory protein [41,54]
Bp1026b_II2115 GGDEF domain Burkholderia pseudomallei 1026b 99.87 BPSS1971 Two-component system fusion protein [41,54]
Bcam2836 putative DGC Burkholderia cenocepacia J2315 85.70 BPSS2342 Hypothetical protein [51,54]
BTH_II2363 (pdcA) GGDEF domain Burkholderia thailandensis E264 97.43 BPSS2342 Hypothetical protein [53,54]
BTH_II2364 (pdcB) CheC/CheX domain Burkholderia thailandensis E264 98.52 BPSS2343 Hypothetical protein [53,54]
BTH_II2365 (pdcC) phosphate-accepting response regulator Burkholderia thailandensis E264 96.72 BPSS2344 Hypothetical protein [53,54]
Bp1026b_I0571 EAL domain Burkholderia pseudomallei 1026b 99.88 BPSL2744 Hypothetical protein [41,54]
Bp1026b_I1579 EAL domain Burkholderia pseudomallei 1026b 100 BPSL1635 Hypothetical protein [41,54]
Bp1026b_I2260 EAL domain Burkholderia pseudomallei 1026b 99.38 BPSL1286 Hypothetical protein [41,54]
Bp1026b_I2659 EAL domain Burkholderia pseudomallei 1026b 99.53 BPSL0887 Hypothetical protein [41,54]
Bp1026b_I3148 EAL domain Burkholderia pseudomallei 1026b 99.84 BPSL0358 Hypothetical protein [41,54]
Bp1026b_II0879 EAL domain Burkholderia pseudomallei 1026b 99.48 BPSS0799 Hypothetical protein [41,54]
BCAL0652 EAL domain Burkholderia cenocepacia J2315 30.17 BPSL2744 Hypothetical protein [51,54]
Bp1026b_I2284 (CdpA) GGDEF/EAL domain Burkholderia pseudomallei 1026b 99.95 BPSL1263 Hypothetical protein [41,42,54]
BCAL1069 (cdpA) GGDEF/EAL domain Burkholderia cenocepacia J2315 85.52 BPSL1263 Hypothetical protein [51,54,135]
Bp1026b_I2456 GGDEF/EAL domain Burkholderia pseudomallei 1026b 99.79 BPSL1080 Hypothetical protein [41,54]
Bp1026b_I2928 GGDEF/EAL domain Burkholderia pseudomallei 1026b 99.40 BPSL0602 Hypothetical protein [41,54]
Bp1026b_II0885 GGDEF/EAL domain Burkholderia pseudomallei 1026b 99.71 BPSS0805 Hypothetical protein [41,54]
Bp1026b_II2498 GGDEF/EAL domain Burkholderia pseudomallei 1026b 99.83 BPSS2318 Hypothetical protein [41,54]
Bcam1160 putative c-di-GMP Burkholderia cenocepacia 86.75 BPSL1080 Hypothetical protein [51,54]
Bcam1349 CRP/FNR family transcriptional regulator Burkholderia cenocepacia J2315 79.07 BPSL0617 Hypothetical protein [45,54,96,98]
CRP/FNR superfamily Burkholderia pseudomallei K96243 NA BPSL0616 Hypothetical Protein [45]
QS BpsI autoinducer synthase Burkholderia pseudomallei K96243, KHW, H11 100 BPSS0885 BPSS1570 N-acyl-homoserine lactone synthase [54,66]
BpsR autoinducer binding transcriptional regulator Burkholderia pseudomallei K96243, KHW, H11 99.86 BPSS0887 N-acyl-homoserine lactone dependent regulatory protein [54,66]
PA0996 (pqsA) Pseudomonas aeruginosa PAO1 30.36 BPSS0481 HhqA [54,73-75,136]
PA0997 (pqsB) Pseudomonas aeruginosa PAO1 38.32 BPSS0482 HhqB [54,73-75,136]
PA0998 (pqsC) Pseudomonas aeruginosa PAO1 38.59 BPSS0483 HhqC [54,73-75,136]
PA0999 (pqsD) Pseudomonas aeruginosa PAO1 53.68 BPSS0484 HhqD [54,73-75,136]
PA1000 (pqsE) Pseudomonas aeruginosa PAO1 30.36 BPSS0485 HhqE [54,73-75,136]

*NA- Not applicable

J. Microbiol. Biotechnol. 2023;33:15~27 https://doi.org/10.4014/jmb.2207.07032
© J. Microbiol. Biotechnol.