Journal of Microbiology and Biotechnology

eISSN 1738-8872
pISSN 1017-7825

Table. 1.

Table. 1. Table 1

Changes in gut microbiota in IBD.

Phylum	Class	Order	Family	Genus	Species
Bacteroidete	Bacteroidetes UC↑¹, CD↑¹	Bacteroidales CD↓⁴	Rikenellaceae UC↑¹
			Bacteroidaceae	Bacteroides UC↑¹	B.vulgatus CD↓⁴, B. caccae CD↓⁴
			Porphyromonadaceae	Odoribacter
				CD↓², IBD↓²
				Parabacteroides CD↑¹
Firmicutes	Clostridia	Clostridiales CD↓⁴	Lachnospiraceae	Roseburia	R. intestinalis CD↓⁴
UC↓¹, CD↓⁵				UC↓², CD↓³, IBD↓²
				Roseburia	R. hominis UC↓⁶
				UC↓²,CD↓³,IBD↓²
				Lachnobacterium
				UC↑¹
				Coprococcus	C. comes CD↓⁴
			Clostridiaceae CD↓¹	Clostridium	C. nexile CD↓⁴, C. bolteae CD↓⁴
				UC↑², CD↑²
					C. leptum IBD↓⁸
				Blautia	B. hanseni CD↓⁴
					B. coccoides IBD↓⁸
				Butyricicoccus	B. pullicecorumIBD↓¹⁰
			Ruminococcaceae	Ruminococcus CD↓¹	R. gnavus UC↑³, R. gnavus CD↓⁴,
			CD↓^1,3 CD↑²		R.torques CD↓⁴
			Ruminococcaceae	Faecalibacterium	F. prausnitzii UC↓^3,6 CD↓^4,5,8
				CD↓^1,11, CD↑², UC↓⁹
			Peptococcaceae	Phascolactobacterium
			CD↓¹	UC↓², CD↓³
			Eubacteriaceae	Eubacterium	E. rectale UC↓³, CD↓⁴
	Bacilli	Lactobacillales	Leuconostocaceae
			UC↓³
			Lactobacillaceae	Lactobacillus IBD↑⁷
		Gemellales	Gemellaceae	Gemella	G. morbillorum CD↑⁴
	Negativicutes	Selenomonadales	Veillonellaceae	Veillonella	V. parvula CD↑⁴
Actinobacteria	Actinobacteridae	Bifidobacteriales	Bifidobacteriaceae	Bifidobacterium	B. bifidum CD↓⁴, B. longum CD↓⁴,
CD↓¹				CD↓¹, IBD↑⁷	B. adolescentis CD↓⁴, B. dentum CD↓⁴
Proteobacteria	Gammaproteobacteria	Enterobacteriales	Enterobacteriaceae	Escherichia CD↑^{2, 11}	E. coli UC↑³, CD↑⁴, IBD↑⁸
UC↑¹, CD↑¹			CD↑^1,2,4
				Shigella CD↑^{2, 11}
		Pasteurellales	Pasteurellaceae	Hemophilus (spp.)	H. parainfluenzaeCD↑⁴
			CD↑⁴
	Betaproteobacteria	Neisseriales	Neisseriaceae	Eikenella	E. corrodensCD↑⁴
	Deltaproteobacteria	Desulfovibrionales	Desulfovibrionaceae	Bilophila	B. wadsworthiaUC↓³
Fusobacteria	Fusobacteria	Fusobacteriales	Fusobacteriaceae	Fusobacterium	F. nucleatum UC↑³, CD↑⁴
			CD↑⁴
Tenericutes	Mollicutes IBD↓¹²	Anaeroplasmatales IBD↓¹²	Anaeroplasmataceae	Asteroleplasma IBD↓¹²
CD↓^1,12			IBD↓¹²
Tenericutes	Mollicutes IBD↓¹²	Anaeroplasmatales IBD↓¹²	Anaeroplasmataceae	Asteroleplasma IBD↓¹²
CD↓^1,12			IBD↓¹²

*Annotations: superscript numbers 1–12 refer to the following studies: 1. Imhann, Vich Vila et al. 2018; 2. Morgan, Tickle et al. 2012; 3. Knoll, Forslund et al. 2017; 4. Gevers, Kugathasan et al. 2014; 5. Sokol, Pigneur et al. 2008; 6. Machiels, Joossens et al. 2014; 7. Wang, Chen et al. 2014; 8. Duboc, Rajca et al. 2013; 9. Varela, Manichanh et al. 2013; 10. Eeckhaut, Machiels et al. 2013; 11. Thorkildsen, Nwosu et al. 2013; 12. Willing, Dicksved et al. 2010.

J. Microbiol. Biotechnol. 2022;32:825~834 https://doi.org/10.4014/jmb.2203.03022