Journal of Microbiology and Biotechnology

eISSN 1738-8872
pISSN 1017-7825

Table. 2.

Table. 2. Table 2

The distribution of antimicrobial resistance (AMR) genes in the genomes of Lactiplantibacillus plantarum strains.

ARO category	Target antibiotics	Antibiotic gene database^†

		CARD			ARG-ANNOT			ResFinder

		P	S	L	P	S	L	P	S	L
Antibiotic inactivation enzyme	Carbapenem, aminoglycoside, phenicol antibiotic, lincosamide, and streptogramin	14	1	4	11	2	1	2	1	0
Antibiotic target protection protein	Tetracycline and lincosamide	0	1	4	1	0	7	1	0	0
Antibiotic efflux pump	Tetracycline, aminoglycoside, fluoroquinolone, fosfomycin, and macrolide	0	0	66	0	0	16	0	0	0

ARO, antibiotic resistance ontology

^†The AMR genes were searched in a total of 583 Lp. plantarum genomes retrieved from GenBank based on the CARD, ARGANNOT, and ResFinder databases. The results represent the number of genomes containing at least one or more AMR genes. P, perfect hits: 100% similarity sequences with the database sequences; S, strict hits: 90%–100% similarity sequences with the database sequences; L, loose hit: 50%–90% similarity sequences with the database sequences.

J. Microbiol. Biotechnol. 2021;31:1420~1429 https://doi.org/10.4014/jmb.2106.06066