Genetic parts for
Genetic parts | Feature | Reference |
---|---|---|
Constitutive promoters | ||
Mutation at the promoter of the erythromycin resistance gene of |
[31] | |
Genome of |
[34] | |
Promoter of SARP family regulator in |
[33] | |
Promoter of glyceraldehyde-3-phosphate dehydrogenase in |
[35] | |
Promoter of 30S ribosomal protein S12 in |
[35] | |
195 native or synthetic promoters | High-throughput screening in |
[58] |
32 native promoters | Transcriptome data-based selection in |
[38] |
166 native promoters | Transcriptome data-based selection in |
[39] |
2 native promoters | Multi-omics data-based selection in |
[59] |
Inducible promoters | ||
Thiostrepton-induced promoter | [40] | |
ε-caprolactam-induced promoter | [45] | |
Xylose-induced promoter | [46] | |
tcp830 | Tetracycline-induced promoter | [43] |
Resorcinol-induced promoter | [44] | |
Cumate-induced promoter | [44] | |
Terminators | ||
Fd | Bidirectional transcription termination originated from |
[48] |
TD1 | Bidirectional transcription termination originated from |
[49] |
RBS | ||
AAAGGAGG | Typical RBS sequence of |
[134] |
192 native or synthetic RBSs | High-throughput screening in |
[58] |
4 native RBSs | Multi-omics data-based selection in |
[59] |
Reporter genes | ||
n-Decanal as substrate; absorbance at 490 nm wavelength | [61] | |
Soluble starch with 3,5-dinitrosalycilic acid (DNS) as substrate; absorbance at 540 nm wavelength | [64] | |
Catecol as substrate; absorbance at 375 nm wavelength | [62] | |
p-Nitrophenyl-β-D-glucuronide as substrate; absorbance at 415 nm wavelength | [63] | |
eGFP | Green fluorescent protein; excitation wavelength 470-490 nm and emission wavelength 515 nm | [65] |
sfGFP | Green fluorescent protein; excitation wavelength 488 nm and emission wavelength 500~550 nm | [58] |
mRFP | Red fluorescent protein; excitation wavelength 584 nm and emission wavelength 607 nm | [67] |
mCherry | Red fluorescent protein; excitation wavelength 587 nm and emission wavelength 610 nm | [68] |