JMB

Cited by CrossRef (617)

  1. Gayang Lee, Yuko Midorikawa, Takashi Kuda, Mika Harada, Sae Fujita, Hajime Takahashi, Bon Kimura. In vitro antioxidant and anti-glycation properties of Sargassum horneri from golden tides on the South Korean coast and the effect on gut microbiota of mice fed a high-sucrose and low-fibre diet. J Appl Phycol 2022;34:2211
    https://doi.org/10.1007/s10811-022-02756-5
  2. Robin Raveau, Joël Fontaine, Mohamed Hijri, Anissa Lounès-Hadj Sahraoui. The Aromatic Plant Clary Sage Shaped Bacterial Communities in the Roots and in the Trace Element-Contaminated Soil More Than Mycorrhizal Inoculation – A Two-Year Monitoring Field Trial. Front. Microbiol. 2020;11
    https://doi.org/10.3389/fmicb.2020.586050
  3. Shriniketan Puranik, Meenal Vyas, Varun Yennurukadirenahalli Byregowda, Geethashree Kuntayyanapalya Govindaraju, Krishnarao Gandham, Kamala Jayanthi Pagadala Damodaram. Bioprospecting the gut microbiome of major weevil pests of banana. Int J Trop Insect Sci 2024;44:1449
    https://doi.org/10.1007/s42690-024-01201-z
  4. Natsumi Takei, Takashi Kuda, Natsumi Handa, Hajime Takahashi, Bon Kimura. Detection and isolation of typical gut indigenous bacteria in mice fed corn starch, bread flour or whole wheat flour. Food Bioengineering 2022;1:91
    https://doi.org/10.1002/fbe2.12000
  5. Carolyn Damilola Ekpruke, Rachel Alford, Dustin Rousselle, Maksat Babayev, Shikha Sharma, Erik Parker, Kyle Davis, Christopher Hemmerich, Douglas B. Rusch, Patricia Silveyra. Sex-specific alterations in the gut and lung microbiome of allergen-induced mice. Front. Allergy 2024;5
    https://doi.org/10.3389/falgy.2024.1451846
  6. Yiqian Zhang, Jonas Schluter, Lijun Zhang, Xuan Cao, Robert R. Jenq, Hao Feng, Jonathan Haines, Liangliang Zhang. Review and revamp of compositional data transformation: A new framework combining proportion conversion and contrast transformation. Computational and Structural Biotechnology Journal 2024;23:4088
    https://doi.org/10.1016/j.csbj.2024.11.003
  7. Maryse Volery, Valentin Scherz, William Jakob, Diane Bandeira, Vanessa Deggim-Messmer, Anna Lauber-Biason, Johannes Wildhaber, Laurent Falquet, Nigel Curtis, Petra Zimmermann. Study protocol for the ABERRANT study: antibiotic-induced disruption of the maternal and infant microbiome and adverse health outcomes — a prospective cohort study among children born at term. BMJ Open 2020;10:e036275
    https://doi.org/10.1136/bmjopen-2019-036275
  8. Sofia Sintoris, Justyna M. Binkowska, Jonathan L. Gillan, Roy P. Zuurbier, Jonathan Twynam-Perkins, Maartje Kristensen, Lauren Melrose, Paula Lusaretta Parga, Alicia Ruiz Rodriguez, Mei Ling Chu, Sara R. van Boeckel, Joanne G. Wildenbeest, Dawn M. E. Bowdish, Andrew J. Currie, Ryan S. Thwaites, Jurgen Schwarze, Marlies A. van Houten, James P. Boardman, Steve Cunningham, Debby Bogaert, Donald J. Davidson. Nasal cathelicidin is expressed in early life and is increased during mild, but not severe respiratory syncytial virus infection. Sci Rep 2024;14
    https://doi.org/10.1038/s41598-024-64446-1
  9. Caifang Wen, Mirelle Geervliet, Hugo de Vries, Lluís Fabà, Petra J. Roubos-van den Hil, Kerstin Skovgaard, Huub F. J. Savelkoul, Henk A. Schols, Jerry M. Wells, Edwin Tijhaar, Hauke Smidt. Agaricus subrufescens fermented rye affects the development of intestinal microbiota, local intestinal and innate immunity in suckling-to-nursery pigs. anim microbiome 2023;5
    https://doi.org/10.1186/s42523-023-00244-w
  10. Ryota Hosomi, Ayano Nishimoto, Toshihiro Kobayashi, Yuki Ikeda, Megumi Mitsui, Takaki Shimono, Seiji Kanda, Toshimasa Nishiyama, Munehiro Yoshida, Kenji Fukunaga. Dietary Alaska pollock protein alters insulin sensitivity and gut microbiota composition in rats. Journal of Food Science 2020;85:3628
    https://doi.org/10.1111/1750-3841.15413
  11. Maria Tomasino, Mariana Aparício, Inês Ribeiro, Filipa Santos, Miguel Caetano, C. Almeida, Maria de Fátima Carvalho, Ana Mucha. Diversity and Hydrocarbon-Degrading Potential of Deep-Sea Microbial Community from the Mid-Atlantic Ridge, South of the Azores (North Atlantic Ocean). Microorganisms 2021;9:2389
    https://doi.org/10.3390/microorganisms9112389
  12. Svetoslav G. Dimov, Vesselin V. Doytchinov, Neyko Neykov, Tsvetana Muleshkova, Lyubomir Kenderov, Ralitsa Ilieva, Dimitrina Georgieva Miteva, Meglena Kitanova, Slavil Peykov, Mihail Iliev. Observations on the Antagonistic Relationships between Fungi, Archaea, and Bacteria in Livingston Island (Maritime Antarctica) with the Use of Amplicon-Based Metagenomics. Diversity 2024;16:56
    https://doi.org/10.3390/d16010056
  13. Yumeng Xia, Mayu Fukunaga, Takashi Kuda, Minori Goto, Giulia Chiaraluce, Hidemasa Hoshiba, Hajime Takahashi, Bon Kimura. Detection and isolation of protein susceptible indigenous bacteria affected by dietary milk-casein, albumen and soy-protein in the caecum of ICR mice. International Journal of Biological Macromolecules 2020;144:813
    https://doi.org/10.1016/j.ijbiomac.2019.09.159
  14. Sascha M.B. Krause, Márton Szoboszlay, Markus Dier, Martin Erbs, Remy Manderscheid, Hans-Joachim Weigel, Christoph C. Tebbe. Impact of elevated atmospheric CO2 on the wheat rhizomicrobiome under the additional influence of warming, drought, and nitrogen fertilization. European Journal of Soil Biology 2023;117:103515
    https://doi.org/10.1016/j.ejsobi.2023.103515
  15. Litao Guo, Zhimin Li, Jianping Xu. Effects of Cadmium Stress on Bacterial and Fungal Communities in the Whitefly Bemisia tabaci. IJMS 2023;24:13588
    https://doi.org/10.3390/ijms241713588
  16. Anna Júlia Éliás, Viktória Barna, Cristina Patoni, Dóra Demeter, Dániel Sándor Veres, Stefania Bunduc, Bálint Erőss, Péter Hegyi, László Földvári-Nagy, Katalin Lenti. Probiotic supplementation during antibiotic treatment is unjustified in maintaining the gut microbiome diversity: a systematic review and meta-analysis. BMC Med 2023;21
    https://doi.org/10.1186/s12916-023-02961-0
  17. Sara de Sousa Rocha, Sabrina Radames Ferreira da Silva, Jaielison Yandro Pereira da Silva, Viviane Priscila Barros de Medeiros, Flávia Figueira Aburjaile, Rodrigo Dias de Oliveira Carvalho, Marcelo Sobral da Silva, Josean Fechine Tavares, Yuri Mangueira do Nascimento, Marcos dos Santos Lima, Cristiane Francisca Costa Sassi, Mariana Monteiro, José Luiz de Brito Alves, Thatyane Mariano Rodrigues de Albuquerque, Maria Elieidy Gomes de Oliveira, Evandro Leite de Souza. Exploring the potential prebiotic effects of Opuntia dillenii (Ker Gawl). Haw (Cactaceae) cladodes on human intestinal microbiota. Journal of Functional Foods 2024;118:106259
    https://doi.org/10.1016/j.jff.2024.106259
  18. Oliver A. Stewart, Fen Wu, Yu Chen. The role of gastric microbiota in gastric cancer. Gut Microbes 2020;11:1220
    https://doi.org/10.1080/19490976.2020.1762520
  19. Sainan Zhao, Raymond Lau, Ming-Hsu Chen. Influence of chain length on the colonic fermentation of xylooligosaccharides. Carbohydrate Polymers 2024;331:121869
    https://doi.org/10.1016/j.carbpol.2024.121869
  20. V. K. Singh, Sumit K. Soni, Pradeep K. Shukla, Anju Bajpai, Laxmi. Application of Paclobutrazol Altered the Soil Bacterial Diversity and Richness of Mango Orchards: A Metagenomic Study. Applied Fruit Science 2024;66:1163
    https://doi.org/10.1007/s10341-024-01074-z
  21. Renjin Chen, Leran Wang, Tammy Koch, Vanessa Curtis, Huiqing Yin-DeClue, Scott A. Handley, Liang Shan, Michael J. Holtzman, Mario Castro, Leyao Wang. Sex effects in the association between airway microbiome and asthma. Annals of Allergy, Asthma & Immunology 2020;125:652
    https://doi.org/10.1016/j.anai.2020.09.007
  22. Upashna Chettri, S. R. Joshi. A first calibration of culturable bacterial diversity and their dual resistance to heavy metals and antibiotics along altitudinal zonation of the Teesta River. Arch Microbiol 2022;204
    https://doi.org/10.1007/s00203-022-02858-1
  23. Guojing Zhang, Tao Liu, Dan Zhao, Xindi Sun, Weijia Xing, Shuang Zhang, Lei Yan. External magnetic field have significant effects on diversity of magnetotactic bacteria in sediments from Yangtze River, Chagan Lake and Zhalong Wetland in China. Ecotoxicology and Environmental Safety 2023;266:115604
    https://doi.org/10.1016/j.ecoenv.2023.115604
  24. Dong-Mei Zhang, Qing Teng, Dongqing Zhang, Ghulam Jilani, Wei-Ming Ken, Zhi-Peng Yang, Tajwar Alam, Muhammad Ikram, Zahid Iqbal. Performance and microbial community dynamics in anaerobic continuously stirred tank reactor and sequencing batch reactor (CSTR-SBR) coupled with magnesium-ammonium-phosphate (MAP)-precipitation for treating swine wastewater. Bioresource Technology 2021;320:124336
    https://doi.org/10.1016/j.biortech.2020.124336
  25. E. S. Klimenko, N. L. Belkova, L. V. Rychkova, M. A. Darenskaya, O. A. Tugarinova, N. V. Semenova, Yu. S. Savinova, O. V. Bugun, D. B. Balzhirova, L. I. Kolesnikova. Alpha Diversity Indices as Indicators of the Variability of Gut Microbiota in Obese Adolescents of Different Ethnicities. Bull Exp Biol Med 2024;176:591
    https://doi.org/10.1007/s10517-024-06073-4
  26. Alessandro Benedetto, Elisa Robotti, Masho Hilawie Belay, Arianna Ghignone, Alessia Fabbris, Eleonora Goggi, Simone Cerruti, Marcello Manfredi, Elettra Barberis, Simone Peletto, Alessandra Arillo, Nunzia Giaccio, Maria Angela Masini, Jessica Brandi, Daniela Cecconi, Emilio Marengo, Paola Brizio. Multi-Omics Approaches for Freshness Estimation and Detection of Illicit Conservation Treatments in Sea Bass (Dicentrarchus Labrax): Data Fusion Applications. IJMS 2024;25:1509
    https://doi.org/10.3390/ijms25031509
  27. Sandra J. Weiss, Maryam Hamidi. Maternal stress during the third trimester of pregnancy and the neonatal microbiome. The Journal of Maternal-Fetal & Neonatal Medicine 2023;36
    https://doi.org/10.1080/14767058.2023.2214835
  28. Da Hyeon Choi, Jiwon Park, Ju Kwang Choi, Kyeong Eun Lee, Won Hee Lee, Jinho Yang, Ju Yeon Lee, Yoon Jeong Park, Chan Oh, Ho-Ryun Won, Bon Seok Koo, Jae Won Chang, Yoon Shin Park. Association between the microbiomes of tonsil and saliva samples isolated from pediatric patients subjected to tonsillectomy for the treatment of tonsillar hyperplasia. Exp Mol Med 2020;52:1564
    https://doi.org/10.1038/s12276-020-00487-6
  29. Ana Valéria Ulhano Braga, Márcio André Miranda, Hiroshi Aoyama, Flavio Luís Schmidt. Study on coffee quality improvement by self-induced anaerobic fermentation: Microbial diversity and enzymatic activity. Food Research International 2023;165:112528
    https://doi.org/10.1016/j.foodres.2023.112528
  30. Xinyi Cao, Dayong Zhao, Chaoran Li, Lisa Röttjers, Karoline Faust, Hongjie Zhang. Regime transition Shapes the Composition, Assembly Processes, and Co-occurrence Pattern of Bacterioplankton Community in a Large Eutrophic Freshwater Lake. Microb Ecol 2022;84:336
    https://doi.org/10.1007/s00248-021-01878-6
  31. Haythem Najah, Rodrigo C. L. Edelmuth, Maria Cristina Riascos, Alex Grier, Hala Al Asadi, Jacques A. Greenberg, Ileana Miranda, Carl V. Crawford, Brendan M. Finnerty, Thomas J. Fahey, Rasa Zarnegar. Long-term potassium-competitive acid blockers administration causes microbiota changes in rats. Surg Endosc 2023;37:7980
    https://doi.org/10.1007/s00464-023-10269-6
  32. Miguel Blanco-Fuertes, Florencia Correa-Fiz, Sergi López-Serrano, Marina Sibila, Virginia Aragon. Sow vaccination against virulent Glaesserella parasuis shapes the nasal microbiota of their offspring. Sci Rep 2022;12
    https://doi.org/10.1038/s41598-022-07382-2
  33. Oscar Fernando Herrera Adarme, Bruno Eduardo Lobo Baêta, Murillo Cardoso Torres, Fabian Camilo Otalora Tapiero, Leandro Vinicius Alves Gurgel, Silvana de Queiroz Silva, Sérgio Francisco de Aquino. Biogas production by anaerobic co-digestion of sugarcane biorefinery byproducts: Comparative analyses of performance and microbial community in novel single-and two-stage systems. Bioresource Technology 2022;354:127185
    https://doi.org/10.1016/j.biortech.2022.127185
  34. Shuling Zhao, Matthias C. Rillig, Haijian Bing, Qingliang Cui, Tianyi Qiu, Yongxing Cui, Josep Penuelas, Baiyan Liu, Shiqi Bian, Fazel Abdolahpur Monikh, Jing Chen, Linchuan Fang. Microplastic pollution promotes soil respiration: A global‐scale meta‐analysis. Global Change Biology 2024;30
    https://doi.org/10.1111/gcb.17415
  35. Carmen Rubio, Marta Puerto, Juan J. García-Rodríquez, Van B. Lu, Irma García-Martínez, Rosa Alén, Patricia Sanmartín-Salinas, M. Val Toledo-Lobo, Jorge Saiz, Javier Ruperez, Coral Barbas, Luis Menchén, Fiona M. Gribble, Frank Reimann, Luis G. Guijarro, Jose M. Carrascosa, Ángela M. Valverde. Impact of global PTP1B deficiency on the gut barrier permeability during NASH in mice. Molecular Metabolism 2020;35:100954
    https://doi.org/10.1016/j.molmet.2020.01.018
  36. Amanda de Deus, Gabriele Gonçalves, Jenilson da Silva, Luís Cláudio de Jesus, Ana Paula S. Azevedo‐Santos, Hivana Dall Agnol, Silma Regina Pereira. Microbiome reveals inflammatory‐related bacteria and putative functional pathways involved in human papillomavirus‐associated penile squamous cell carcinoma. Andrology 2024;12:809
    https://doi.org/10.1111/andr.13545
  37. R. Vinothkumar, Jaffer Y. Dar, V.S. Bharti, Arjun Singh, A. Vennila, Irfan A. Bhat, P.K. Pandey. Heterotrophic nitrifying and aerobic denitrifying bacteria: Characterization and comparison of shrimp pond and effluent discharge channel in aspects of composition and function. Aquaculture 2021;539:736659
    https://doi.org/10.1016/j.aquaculture.2021.736659
  38. Aroa Lopez-Santamarina, Laura Sinisterra-Loaiza, Alicia Mondragón-Portocarrero, Jaime Ortiz-Viedma, Alejandra Cardelle-Cobas, Carlos Manuel Franco Abuín, Alberto Cepeda. Potential prebiotic effect of two Atlantic whole brown seaweeds, Saccharina japonica and Undaria pinnatifida, using in vitro simulation of distal colonic fermentation. Front. Nutr. 2023;10
    https://doi.org/10.3389/fnut.2023.1170392
  39. Tijs J. M. van den Bosch, Cornelia U. Welte. The Microbial Diversity of Cabbage Pest Delia radicum Across Multiple Life Stages. Front. Microbiol. 2020;11
    https://doi.org/10.3389/fmicb.2020.00315
  40. Carlos M. Dos-Santos, Náthalia V. S. Ribeiro, Stefan Schwab, José I. Baldani, Marcia S. Vidal. The Effect of Inoculation of a Diazotrophic Bacterial Consortium on the Indigenous Bacterial Community Structure of Sugarcane Apoplast Fluid. Curr Microbiol 2021;78:3079
    https://doi.org/10.1007/s00284-021-02571-0
  41. Guoxiang Liao, Xiaodan Ning, Yuling Yang, Zongde Wang, Guorong Fan, Xuefang Wang, Dan Fu, Juan Liu, Ming Tang, Shangxing Chen, Jiawei Wang. Main Habitat Factors Driving the Phenotypic Diversity of Litsea cubeba in China. Plants 2023;12:3781
    https://doi.org/10.3390/plants12213781
  42. Sandra Gabriela Sánchez-González, Bárbara Gabriela Cárdenas-del-Castillo, Elvira Garza-González, Gerardo R Padilla-Rivas, Isaías Rodríguez-Balderrama, Consuelo Treviño-Garza, Fernando Félix Montes-Tapia, Gerardo C Palacios-Saucedo, Anthony Gutiérrez-Rodríguez, Manuel Enrique de-la-O-Cavazos. Gut microbiota in preterm infants receiving breast milk or mixed feeding. World J Clin Pediatr 2024;13
    https://doi.org/10.5409/wjcp.v13.i2.90499
  43. Yumeng Xia, Takashi Kuda, Ayumi Miyashita, Mahiro Yamamoto, Kazuya Koga, Ayaka Nakamura, Hajime Takahashi. Effects of cumin, coriander, and sichuan pepper on microbiota and the antioxidant capacities of human faecal cultures. Food and Humanity 2023;1:1091
    https://doi.org/10.1016/j.foohum.2023.09.001
  44. Genki Tanaka, Nozomi Hagihara, Ryota Hosomi, Takaki Shimono, Seiji Kanda, Toshimasa Nishiyama, Munehiro Yoshida, Kenji Fukunaga. Dietary Alaska Pollock Protein Attenuates the Experimental Colitis Induced by Dextran Sulfate Sodium via Regulation of Gut Microbiota and Its Metabolites in Mice. Metabolites 2022;12:44
    https://doi.org/10.3390/metabo12010044
  45. Priya Nimish Deo, Revati Shailesh Deshmukh. Oral microbiome research – A Beginner's glossary. 2022;26:87
    https://doi.org/10.4103/jomfp.jomfp_455_21
  46. Guillaume Corre, Anne Galy. Evaluation of diversity indices to estimate clonal dominance in gene therapy studies. Molecular Therapy - Methods & Clinical Development 2023;29:418
    https://doi.org/10.1016/j.omtm.2023.05.003
  47. Xinwei Ma, Baihui Ren, Jianxin Yu, Jiayu Wang, Long Bai, Jiahuan Li, Daiyan Li, Meng Meng. Changes in grassland soil types lead to different characteristics of bacterial and fungal communities in Northwest Liaoning, China. Front. Microbiol. 2023;14
    https://doi.org/10.3389/fmicb.2023.1205574
  48. Mattia Fragola, Augusto Arsieni, Nicola Carelli, Sabrina Dattoli, Sante Maiellaro, Maria Rita Perrone, Salvatore Romano. Pollen Monitoring by Optical Microscopy and DNA Metabarcoding: Comparative Study and New Insights. IJERPH 2022;19:2624
    https://doi.org/10.3390/ijerph19052624
  49. Alba Regueira‐Iglesias, Carlos Balsa‐Castro, Triana Blanco‐Pintos, Inmaculada Tomás. Critical review of 16S rRNA gene sequencing workflow in microbiome studies: From primer selection to advanced data analysis. Molecular Oral Microbiology 2023;38:347
    https://doi.org/10.1111/omi.12434
  50. Anna-Lena Höger, Carola Griehl, Matthias Noll. Infection with intracellular parasite Amoeboaphelidium protococcarum induces shifts in associated bacterial communities in microalgae cultures. J Appl Phycol 2021;33:2863
    https://doi.org/10.1007/s10811-021-02542-9
  51. Mahiro Yamamoto, Hikaru Ogura, Takashi Kuda, Yumeng Xia, Ayaka Nakamura, Hajime Takahashi, Junji Inoue, Shu Takayanagi. Detection of typical indigenous gut bacteria related to kanpyo Lagenaria siceraria var. hispida powder in murine caecum and human faecal cultures. 3 Biotech 2024;14
    https://doi.org/10.1007/s13205-024-03960-5
  52. Amandine Ducousso-Détrez, Robin Raveau, Joël Fontaine, Mohamed Hijri, Anissa Lounès-Hadj Sahraoui. Glomerales Dominate Arbuscular Mycorrhizal Fungal Communities Associated with Spontaneous Plants in Phosphate-Rich Soils of Former Rock Phosphate Mining Sites. Microorganisms 2022;10:2406
    https://doi.org/10.3390/microorganisms10122406
  53. Yueguo Li, Haijiao Fu, Xianbo Su, Detian Yan, Gang Wang, Quan Li, Xiaoming Wang. Microbial coalbed gas and its geological formation process in the Jimsar region of the southern Junggar Basin, NW China. Geoenergy Science and Engineering 2024;233:212596
    https://doi.org/10.1016/j.geoen.2023.212596
  54. Janaina Iltchenco, Mariana Dalsoto Smiderle, Juliano Gaio, Flaviane Eva Magrini, Suelen Paesi. Metataxonomic characterization of the microbial present in the anaerobic digestion of turkey litter waste with the addition of two inocula: allochthonous and commercial. Int Microbiol 2024
    https://doi.org/10.1007/s10123-024-00561-3
  55. W. Smułek, M. Sydow, J. Zabielska-Matejuk, E. Kaczorek. Bacteria involved in biodegradation of creosote PAH – A case study of long-term contaminated industrial area. Ecotoxicology and Environmental Safety 2020;187:109843
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  56. Ning Duan, Lidong Li, Xiaolong Liang, Aubrey Fine, Jie Zhuang, Mark Radosevich, Sean M. Schaeffer. Variation in Bacterial Community Structure Under Long-Term Fertilization, Tillage, and Cover Cropping in Continuous Cotton Production. Front. Microbiol. 2022;13
    https://doi.org/10.3389/fmicb.2022.847005
  57. Simon Labarthe, Sandra Plancade, Sebastien Raguideau, Florian Plaza Oñate, Emmanuelle Le Chatelier, Marion Leclerc, Beatrice Laroche. Four functional profiles for fibre and mucin metabolism in the human gut microbiome. Microbiome 2023;11
    https://doi.org/10.1186/s40168-023-01667-y
  58. Svetlana N. Yurgel, Nivethika Ajeethan, Andrei Smertenko. Response of Plant-Associated Microbiome to Plant Root Colonization by Exogenous Bacterial Endophyte in Perennial Crops. Front. Microbiol. 2022;13
    https://doi.org/10.3389/fmicb.2022.863946
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  60. Boshen Gong, Chuyuan Wang, Fanrui Meng, Haoyu Wang, Bo Song, Yang Yang, Zhongyan Shan. Association Between Gut Microbiota and Autoimmune Thyroid Disease: A Systematic Review and Meta-Analysis. Front. Endocrinol. 2021;12
    https://doi.org/10.3389/fendo.2021.774362
  61. Sokteang Sean, Chloe Tran, Pichetra Ou, Chanpisey Ouk, Dominique de Ziegler. How Should We Assess the Endometrium of Infertile Patients? What Does the Future Look Like?. FandR 2023;05:134
    https://doi.org/10.1142/S2661318223300039
  62. Dinesh Kumar, Meenu Saraf, Chaitanya G. Joshi, Madhvi Joshi. Rhizosphere microbiome analysis of healthy and infected cumin (Cuminum cyminum L.) varieties from Gujarat, India. Current Research in Microbial Sciences 2022;3:100163
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  63. Tzu-Hsien Lin, Ying-Hsiang Chou, Tzu-Yu Hsu, Chun-Hui Hung, Chane-Yu Lai. Association among polydisperse aerodynamic size of bioaerosols, biodiversity and urbanization in kindergartens. Chemosphere 2024;359:142333
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  64. Qiong Chen, Xiufeng Cao, Xiangkun Nie, Yuanyuan Li, Taibo Liang, Lijie Ci. Alleviation role of functional carbon nanodots for tomato growth and soil environment under drought stress. Journal of Hazardous Materials 2022;423:127260
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  65. Jeff Gamlin, Renee Caird, Neha Sachdeva, Yu Miao, Claudia Walecka-Hutchison, Shaily Mahendra, Susan K. De Long. Developing a microbial community structure index (MCSI) as an approach to evaluate and optimize bioremediation performance. Biodegradation 2024;35:993
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  66. Paul Jankowski, Jaydon Gan, Tri Le, Michaela McKennitt, Audrey Garcia, Kadir Yanaç, Qiuyan Yuan, Miguel Uyaguari-Diaz. Metagenomic community composition and resistome analysis in a full-scale cold climate wastewater treatment plant. Environmental Microbiome 2022;17
    https://doi.org/10.1186/s40793-022-00398-1
  67. Vijayasree V. Giridharan, Jaqueline S. Generoso, Leonardo Lence, Gabriela Candiotto, Emílio Streck, Fabricia Petronilho, Anilkumar Pillai, Tarek Sharshar, Felipe Dal-Pizzol, Tatiana Barichello. A crosstalk between gut and brain in sepsis-induced cognitive decline. J Neuroinflammation 2022;19
    https://doi.org/10.1186/s12974-022-02472-4
  68. María E. Ochoa-Hernández, Andrea Reynoso-Varela, Luis R. Martínez-Córdova, Belén Rodelas, Ulises Durán, Rocío J. Alcántara-Hernández, Denisse Serrano-Palacios, Kadiya Calderón. Linking the shifts in the metabolically active microbiota in a UASB and hybrid anaerobic-aerobic bioreactor for swine wastewater treatment. Journal of Environmental Management 2023;344:118435
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  69. Marie K. Wieneke, Felix Dach, Claudia Neumann, Dennis Görlich, Lena Kaese, Theo Thißen, Angelika Dübbers, Christina Kessler, Jörg Große-Onnebrink, Peter Küster, Holger Schültingkemper, Bianca Schwartbeck, Johannes Roth, Jerzy-Roch Nofer, Janina Treffon, Julia Posdorfer, Josefine Marie Boecken, Mariele Strake, Miriam Abdo, Sophia Westhues, Barbara C. Kahl, Paul D. Fey. Association of Diverse Staphylococcus aureus Populations with Pseudomonas aeruginosa Coinfection and Inflammation in Cystic Fibrosis Airway Infection. mSphere 2021;6
    https://doi.org/10.1128/mSphere.00358-21
  70. Anil Poudel, Yuan Kang, Rabindra K Mandal, Anwar Kalalah, Patrick Butaye, Terri Hathcock, Patrick Kelly, Paul Walz, Kenneth Macklin, Russell Cattley, Stuart Price, Folasade Adekanmbi, Lixin Zhang, Steven Kitchens, Bernhard Kaltenboeck, Chengming Wang. Comparison of microbiota, antimicrobial resistance genes and mobile genetic elements in flies and the feces of sympatric animals. 2020;96
    https://doi.org/10.1093/femsec/fiaa027
  71. Sainan Zhao, Bruce S. Dien, Stephen R. Lindemann, Ming-Hsu Chen. Controlling autohydrolysis conditions to produce xylan-derived fibers that modulate gut microbiota responses and metabolic outputs. Carbohydrate Polymers 2021;271:118418
    https://doi.org/10.1016/j.carbpol.2021.118418
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