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  1. Howard A, O’Donoghue M, Feeney A, Sleator RD. 2012. Acinetobacter baumannii. Virulence 3: 243-250.
    Pubmed PMC CrossRef
  2. Peleg AY, Seifert H, Paterson DL. 2008. Acinetobacter baumannii: Emergence of a successful pathogen. Clin. Microbiol. Rev. 21: 538582.
    Pubmed PMC CrossRef
  3. Wong D, Nielsen, TB, Bonomo RA, Pantapalangkoor P, Luna B, Spellberg B. 2016. Clinical and pathophysiological overview of Acinetobacter infections: a century of challenges. Clin. Microbiol. Rev. 30: 409-447.
    Pubmed PMC CrossRef
  4. Rebic V, Masic N, Teskeredzic S, Aljicevic M, Abduzaimovic A, Rebic D. 2018. The importance of Acinetobacter species in the hospital environment. Med. Arch. 72: 330-334.
    Pubmed PMC CrossRef
  5. Bitrian M, Gonzalez RH, Paris G, Hellingwerf KJ, Nudel CB. 2013. Blue-light-dependent inhibition of twitching motility in Acinetobacter baylyi ADP1: additive involvement of three BLUF-domain-containing proteins. Microbiology 159: 1828-1841.
    Pubmed CrossRef
  6. Juni E. 2005. Genus II. Acinetobacter Brisou and Prevot 1954, pp 425-437. In Brenner DJ, Krieg NR, Stanley JT (ed) Bergey’s Manual of Systematic Bacteriology, vol 2B, 2nd Ed. Springer, New York.
  7. Yang C, Guo ZB, Du ZM, Yang HY, Bi YJ, Wang GQ, et al. 2012. Cellular fatty acids as chemical markers for differentiation of Acinetobacter baumannii and Acinetobacter calcoaceticus. Biomed. Environ. Sci. 25: 711-717.
  8. Luo Y, Javed MA, Deneer H, Chen X. 2018. Nutrient depletion-induced production of tri-acylated glycerophospholipids in Acinetobacter radioresistens. Sci. Rep. 8: 7470.
    Pubmed PMC CrossRef
  9. Hiraishi A, Masamune K, Kitamura H. 1989. Characterization of the bacterial population structure in an anaerobic-aerobic activated sludge system on the basis of respiratory quinone profiles. Appl. Environ. Microbiol. 55: 897-901.
    Pubmed PMC CrossRef
  10. Carvalheira A, Ferreira V, Sillva J, Teixeira P. 2016. Enrichment of Acinetobacter spp. from food samples. Food Microbiol. 55: 123-127.
    Pubmed CrossRef
  11. Han RH, Lee JE, Yoon SH, Kim GB. 2020. Acinetobacter pullicarnis sp. nov. isolated from chicken meat. Arch. Microbiol. 202: (Online ahead of print.)
    Pubmed CrossRef
  12. Baker GC, Smith JJ, Cowan DA. 2003. Review and re-analysis of domain-specific 16S primers. J. Microbiol. Methods 55: 541-555.
    Pubmed CrossRef
  13. Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406425.
  14. Felsenstein J. 1981. Evolutionary tree from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 17: 368-376.
    Pubmed CrossRef
  15. Jukes TH, Cantor CR. 1969. Evolution of protein molecules, pp. 21-132. In Munro HN (ed) Mammalian Protein Metabolism, New York, Academic Press, Cambridge.
    CrossRef
  16. Felsenstein J. 1985. Confidence limits on phylogenies: an approach using bootstrap. Evolution 39: 783-791.
    Pubmed CrossRef
  17. Lee I, Kim YO, Park SC, Chun J. 2016. OrthoANI: an improved algorithm and software for calculating average nucleotide identity. Int. J. Syst. Evol. Microbiol. 66: 1100-1103.
    Pubmed CrossRef
  18. Meier-Kolthoff JP, Auch AF, Klenk H. Goker M. 2013. Genome sequence-based species delimitation with confidence intervals and improved distance functions. BMC Bioinformatics 14: 60.
    Pubmed PMC CrossRef
  19. Hyatt D, Chen GL, LoCascio PF, Land ML, Larimer FW, Hauser LJ. 2010. Prodigal: prokaryotic gene recognition and translation initiation site identification. BMC Bioinformatics. 11: 1-11.
    Pubmed PMC CrossRef
  20. Steinegger M, Söding J. 2018. Clustering huge protein sequence sets in linear time. Nat. Commun. 9: 2542.
    Pubmed PMC CrossRef
  21. Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32: 1792-1797.
    Pubmed PMC CrossRef
  22. Kumar S, Stecher G, Li M, Knyaz C, Tamura K. 2018. MEGA X: molecular evolutionary genetics analysis across computing platforms. Mol. Biol. Evol. 35: 1547-1549.
    Pubmed PMC CrossRef
  23. Nguyen LT, Schmidt HA, von Haeseler A, Minh BQ. 2015. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol. Biol. Evol. 32: 268-274.
    Pubmed PMC CrossRef
  24. Tittsler RP, Sandholzer LA. 1936. The use of semi-solid agar for the detection of bacterial motility. J. Bacteriol. 31: 575-580.
    Pubmed PMC CrossRef
  25. Fautz E, Reichenbach H. 1980. A simple test for flexirubin-type pigments. FEMS Microbiol. Lett. 8: 87-91.
    CrossRef
  26. Smith PB, Hancock GA, Rhoden DL. 1969. Improved medium for detecting deoxyribonuclease-producing bacteria. Appl. Microbiol. 18: 991-993.
    Pubmed PMC CrossRef
  27. Lal A, Cheeptham N. 2012. Starch agar protocol. Available from https://www.asmscience.org/content/education/protocol/protocol.3780/. Accessed Nov. 12, 2019.
  28. Plou FJ, Ferrer M, Nuero OM, Calvo MV, Alcalde M, Reyes F, et al. 1998. Analysis of Tween 80 as an esterase/lipase substrate for lipolytic activity assay. Biotechnol. Tech. 12: 183-186.
    CrossRef
  29. Minnikin DE, O’Donell AG, Goodfellow M, Alderson G, Athalye M, Schaal A, et al. 1984. An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids. J. Microbiol. Methods 2: 233-241.
    CrossRef
  30. Hiraishi A, Ueda Y, Ishihara J, Mori T. 1996. Comparative lipoquinone analysis of influent sewage and activated sludge by highperformance liquid chromatography and photodiode array detection. J. Gen. Appl. Microbiol. 42: 113-122.
    CrossRef
  31. Komagata K, Suzuki KI. 1987. Lipid and call-wall analysis in bacterial systematics. Method. Microbiol. 19: 161-207.
    CrossRef
  32. Kuykendall LD, Roy MA, O’Niell JJ, Devine TE. 1988. Fatty acids, antibiotic resistance, and deoxyribonucleic acid homology groups of Bradyrhizobium japonuicum. Int. J. Syst. Evol. Microbiol. 38: 358-361.
    CrossRef
  33. Alcock et al. 2020. CARD 2020: antibiotic resistome surveillance with the comprehensive antibiotic resistance database. Nucleic Acids Res. 48: D517-D525.
    Pubmed PMC CrossRef
  34. Hudzicki J. 2009. Kirby-Bauer disk diffusion susceptibility test protocol. Available at https://www.asm.org/Protocols/Kirby-Bauer-Disk-Diffusion-Susceptibility-Test-Pro/. Accessed Nov. 11, 2019.
  35. CLSI. 2019. Performance Standards for Antimicrobial Susceptibility Testing. 29th ed. Available from http://em100.edaptivedocs.net/dashboard.aspx. Accessed Dec. 12, 2019.
  36. Chun J, Oren A, Ventosa A, Christensen H, Arahal DR, da Costa MS, et al. 2016. Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes. Int. J. Syst. Evol. Microbiol. 68: 461-466.
    Pubmed CrossRef
  37. Liu Y, Rao Q, Tu J, Zhang J, Huang M, Hu B, et al. 2018. Acinetobacter piscicola sp. nov., isolated from diseased farmed Murray cod (Maccullochella peelii peelii). Int. J. Syst. Evol. Microbiol. 68: 905-910.
    Pubmed CrossRef
  38. Ho MT, Weselowski B, Yuan ZC. 2017. Complete genome sequence of Acinetobacter calcoaceticus CA16, a bacterium capable of degrading diesel and lignin. Genome Announc. 5: 1-2.
    Pubmed PMC CrossRef